Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 RNU6-891P-201ENST00000384280 111 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 MIR562-201ENST00000384894 95 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 MIR125B2-201ENST00000385128 89 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 FCF1P9-201ENST00000412546 282 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 CALM2P4-201ENST00000430810 426 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 RNU6-469P-201ENST00000516253 101 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AL139286.2-201ENST00000606838 396 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 MIR15A-201ENST00000607334 83 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AC104458.1-201ENST00000608243 463 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 U6.73-201ENST00000619194 103 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 MIR501-201ENST00000390204 84 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AL117339.3-201ENST00000418733 162 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AL360271.2-201ENST00000447710 161 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 MIR4676-201ENST00000583078 72 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AC022893.3-201ENST00000607665 437 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 FRG1KP-201ENST00000623592 341 ntBASIC-1.06□□□□□ -2.58
SCN11AQ9UI33 MIR148A-201ENST00000362215 68 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 SNORA75B-201ENST00000384053 137 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 MIR19A-201ENST00000384878 82 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 MT-TY-201ENST00000387409 66 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 SNORA26.3-201ENST00000391119 136 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 RNU6-1245P-201ENST00000411130 106 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 Z98949.2-201ENST00000440996 144 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 AC009237.7-201ENST00000447357 229 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 SUMO2P5-201ENST00000506790 245 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 MTND2P38-201ENST00000522536 667 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 MIR4771-2-201ENST00000577758 74 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 MIR4666A-201ENST00000580160 79 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 MIR4771-1-201ENST00000582617 74 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 AC005332.6-201ENST00000613178 446 ntBASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
SCN11AQ9UI33 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 MIR136-201ENST00000385207 82 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 AC016632.1-201ENST00000503994 196 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 AC116562.3-201ENST00000506136 177 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 MIR2115-201ENST00000516657 100 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 MIR3165-201ENST00000579874 75 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 AC104073.3-201ENST00000610942 955 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 SCARNA4-201ENST00000629045 128 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 MIR563-201ENST00000385080 79 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 MTCO1P57-201ENST00000432182 261 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 USP9YP28-201ENST00000435142 589 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 MIR378F-201ENST00000578143 78 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 AC008608.1-201ENST00000603910 127 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 RNU1-29P-201ENST00000606574 126 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 AP001033.2-201ENST00000609701 1003 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 AC104260.1-201ENST00000616660 539 ntBASIC-1.08□□□□□ -2.58
SCN11AQ9UI33 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 RNA5SP48-201ENST00000363969 126 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 RNA5SP95-201ENST00000410319 137 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 RNU6-293P-201ENST00000411259 106 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 SCARNA17-201ENST00000516183 144 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 RNU6-135P-201ENST00000516769 101 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 DEFB130C-202ENST00000530001 230 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 AC020891.4-201ENST00000605745 93 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 MIR6507-201ENST00000613630 70 ntBASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.09□□□□□ -2.58
SCN11AQ9UI33 MIR377-201ENST00000362145 69 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 MIR7-1-201ENST00000384871 110 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 MIR549A-201ENST00000385268 96 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 AC244250.2-201ENST00000418731 148 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 MTND1P26-201ENST00000440488 538 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 AC018448.1-201ENST00000552843 316 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 RPL21P9-201ENST00000556149 474 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 AC006600.1-201ENST00000572529 153 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 AC087683.1-201ENST00000591187 441 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 Z99497.2-201ENST00000603634 310 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 AC245008.1-201ENST00000608123 476 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 AC134878.1-201ENST00000619901 243 ntBASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.1□□□□□ -2.59
SCN11AQ9UI33 MTCO1P20-201ENST00000425366 358 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AL133396.1-201ENST00000432048 687 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AL353572.1-201ENST00000442490 417 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AC013470.1-201ENST00000453438 462 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 MIR18B-201ENST00000454574 71 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 SCARNA18-201ENST00000459004 134 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 RNU7-57P-201ENST00000459540 60 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 RNU6-221P-201ENST00000459541 99 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AC010486.3-201ENST00000511602 785 ntBASIC-1.11□□□□□ -2.59
SCN11AQ9UI33 AC021146.6-201ENST00000514659 117 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms