Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 DEFB122-202ENST00000569013 197 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 MIR4643-201ENST00000577473 78 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 AL670379.2-201ENST00000604983 252 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 AL449363.1-201ENST00000617815 186 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 AC064859.1-201ENST00000624741 174 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 MIR7157-201ENST00000635801 60 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 AC080128.1-201ENST00000474389 1917 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
DKK3Q9UBP4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
DKK3Q9UBP4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
DKK3Q9UBP4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
DKK3Q9UBP4 UBE2WP1-201ENST00000362030 340 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.54-201ENST00000362766 105 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.101-201ENST00000363154 102 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.383-201ENST00000383855 97 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 U6atac.2-201ENST00000408644 118 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 RNU2-54P-201ENST00000410299 190 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 RNA5SP475-201ENST00000410568 110 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 RNA5SP504-201ENST00000410676 117 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 RNU6-1199P-201ENST00000411249 104 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 AL139156.1-201ENST00000412785 841 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 POLR2KP2-201ENST00000438155 177 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 AL513328.1-201ENST00000446460 224 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 AC023141.11-201ENST00000508864 202 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 RNU6-138P-201ENST00000515952 107 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 HSPE1P18-201ENST00000517602 280 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 AP002001.1-203ENST00000534002 267 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 MIR4635-201ENST00000583759 79 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 AC091932.3-201ENST00000624223 323 ntBASIC2.64□□□□□ -1.99
DKK3Q9UBP4 SNORA25.1-201ENST00000362326 128 ntBASIC2.63□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.65-201ENST00000362846 100 ntBASIC2.63□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.269-201ENST00000364685 89 ntBASIC2.63□□□□□ -1.99
DKK3Q9UBP4 RNU6-482P-201ENST00000391068 107 ntBASIC2.63□□□□□ -1.99
DKK3Q9UBP4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.63□□□□□ -1.99
DKK3Q9UBP4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
DKK3Q9UBP4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.63□□□□□ -1.99
DKK3Q9UBP4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.63□□□□□ -1.99
DKK3Q9UBP4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.63□□□□□ -1.99
DKK3Q9UBP4 snoU13.15-201ENST00000459407 104 ntBASIC2.63□□□□□ -1.99
DKK3Q9UBP4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.63□□□□□ -1.99
DKK3Q9UBP4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.63□□□□□ -1.99
DKK3Q9UBP4 AC008873.1-201ENST00000625051 138 ntBASIC2.63□□□□□ -1.99
DKK3Q9UBP4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.63□□□□□ -1.99
DKK3Q9UBP4 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 RNU1-72P-201ENST00000362976 153 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 U3.8-201ENST00000363675 217 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.275-201ENST00000364726 110 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 SNORA80E-201ENST00000384744 137 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 SNORA12-201ENST00000391162 147 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 MIR548I3-201ENST00000408378 149 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 MIR548I1-201ENST00000408810 149 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 AC009963.1-201ENST00000417265 157 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.62□□□□□ -1.99
DKK3Q9UBP4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.62□□□□□ -1.99
DKK3Q9UBP4 MTCO1P5-201ENST00000433573 344 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.62□□□□□ -1.99
DKK3Q9UBP4 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 SNORA27.4-201ENST00000516650 95 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.62□□□□□ -1.99
DKK3Q9UBP4 AC130289.1-201ENST00000577321 73 ntBASIC2.62□□□□□ -1.99
DKK3Q9UBP4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
DKK3Q9UBP4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
DKK3Q9UBP4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.61□□□□□ -1.99
DKK3Q9UBP4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
DKK3Q9UBP4 RNA5SP68-201ENST00000363885 119 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 RNU6-514P-201ENST00000384208 107 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.61□□□□□ -1.99
DKK3Q9UBP4 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 RN7SKP192-201ENST00000411291 327 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 TOMM22P2-201ENST00000430735 237 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 COX6CP14-201ENST00000469580 174 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.61□□□□□ -1.99
DKK3Q9UBP4 AC091959.1-201ENST00000495857 238 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 AC108210.2-201ENST00000503681 201 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.61□□□□□ -1.99
DKK3Q9UBP4 RNU6-966P-201ENST00000516479 104 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 SCARNA3-201ENST00000517097 143 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 RNU2-12P-201ENST00000517216 168 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.61□□□□□ -1.99
DKK3Q9UBP4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.61□□□□□ -1.99
DKK3Q9UBP4 AC018630.3-201ENST00000542637 96 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 MIR4282-201ENST00000583613 67 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 AL162424.1-201ENST00000602325 221 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 AL713866.2-201ENST00000603579 219 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 MIR6817-201ENST00000615588 66 ntBASIC2.61□□□□□ -1.99
DKK3Q9UBP4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.6□□□□□ -1.99
DKK3Q9UBP4 AC007336.1-201ENST00000576365 3828 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
DKK3Q9UBP4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DKK3Q9UBP4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.82-201ENST00000363000 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.92-201ENST00000363043 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.122-201ENST00000363331 96 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.200-201ENST00000364018 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.235-201ENST00000364412 102 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms