Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-948P-201ENST00000516374 107 ntBASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 MIR4770-201ENST00000579149 58 ntBASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 RPL17P51-201ENST00000605218 238 ntBASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 SNORA28-201ENST00000606769 126 ntBASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 AC084368.1-201ENST00000620935 65 ntBASIC-1.68□□□□□ -2.68
CCDC180Q9P1Z9 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 RNA5SP261-201ENST00000410536 106 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 AC079382.1-201ENST00000493346 557 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 AC115990.1-201ENST00000526957 301 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 AC090617.3-201ENST00000573670 475 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 RNY4P36-201ENST00000391116 96 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 U8.16-201ENST00000391279 133 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-370P-201ENST00000411008 104 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 CDK8P2-201ENST00000415020 547 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 RNU7-73P-201ENST00000458743 63 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 RPS29P27-201ENST00000463711 170 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 RPL23AP75-201ENST00000491601 451 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 DPPA3P3-201ENST00000603842 430 ntBASIC-1.69□□□□□ -2.68
CCDC180Q9P1Z9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 USP9YP16-201ENST00000430287 407 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 AL929288.2-201ENST00000446368 407 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 RNU7-102P-201ENST00000458948 62 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 AC023538.1-201ENST00000534576 736 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 MIR4771-2-201ENST00000577758 74 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 MIR4771-1-201ENST00000582617 74 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 AC011458.1-201ENST00000604034 617 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 U7.6-201ENST00000610841 64 ntBASIC-1.7□□□□□ -2.68
CCDC180Q9P1Z9 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-1285P-201ENST00000363480 105 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 U8.6-201ENST00000364939 135 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-424P-201ENST00000384367 105 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-114P-201ENST00000384704 105 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 MIR520C-201ENST00000385005 87 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 SNORD64-201ENST00000386683 67 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-613P-201ENST00000410412 108 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 SNORA13-201ENST00000458790 133 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 AC046134.1-201ENST00000514454 666 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 RNU2-34P-201ENST00000516534 121 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 AC091135.1-201ENST00000585943 307 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 AC012433.1-201ENST00000588916 398 ntBASIC-1.71□□□□□ -2.68
CCDC180Q9P1Z9 AP000568.1-201ENST00000282964 442 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 RNU4-66P-201ENST00000365199 138 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 MIR1305-201ENST00000408300 86 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 MTCO1P17-201ENST00000411522 491 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 MIR18B-201ENST00000454574 71 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-469P-201ENST00000516253 101 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-504P-201ENST00000516568 104 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 RNA5SP33-201ENST00000516687 98 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 MTCO3P15-201ENST00000526563 574 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 AGGF1P4-201ENST00000568249 801 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 AC006600.1-201ENST00000572529 153 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 MIR5591-201ENST00000578248 65 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 AC004223.4-201ENST00000612426 332 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 AC005609.4-201ENST00000625071 447 ntBASIC-1.72□□□□□ -2.68
CCDC180Q9P1Z9 RNU6-545P-201ENST00000362681 104 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 SNORD56.1-201ENST00000362913 68 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 RNU7-94P-201ENST00000459576 63 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 AC026410.2-201ENST00000460281 156 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 AC010525.2-201ENST00000590920 195 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 U6.108-201ENST00000637764 58 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 ZNF204P-201ENST00000416749 2397 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 MIR1253-201ENST00000408273 105 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 MTND4P25-201ENST00000441039 533 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 MTATP6P26-201ENST00000445926 662 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 RNU7-41P-201ENST00000515917 61 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 AC104383.1-201ENST00000530297 370 ntBASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.73□□□□□ -2.69
CCDC180Q9P1Z9 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.74□□□□□ -2.69
CCDC180Q9P1Z9 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.74□□□□□ -2.69
CCDC180Q9P1Z9 MIR544A-201ENST00000384855 91 ntBASIC-1.74□□□□□ -2.69
CCDC180Q9P1Z9 MIR1185-2-201ENST00000408687 86 ntBASIC-1.74□□□□□ -2.69
CCDC180Q9P1Z9 AC015818.7-201ENST00000428754 109 ntBASIC-1.74□□□□□ -2.69
CCDC180Q9P1Z9 AC087499.7-201ENST00000441958 109 ntBASIC-1.74□□□□□ -2.69
CCDC180Q9P1Z9 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.74□□□□□ -2.69
CCDC180Q9P1Z9 AC010468.3-201ENST00000508225 458 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms