Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL121890.1-201ENST00000435457 205 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 Y_RNA.662-201ENST00000516028 97 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 RN7SKP40-201ENST00000517211 242 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 PRELID2P1-201ENST00000552837 301 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 LARP7P3-201ENST00000579888 337 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 AL078604.3-201ENST00000615580 211 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 AL137790.1-201ENST00000634283 177 ntBASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.78□□□□□ -1.96
KCMF1Q9P0J7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.78□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.172-201ENST00000363765 102 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.310-201ENST00000365063 113 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 SNORA72.4-201ENST00000384174 132 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.456-201ENST00000384232 111 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 MIR873-201ENST00000401120 77 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 MIR887-201ENST00000401258 79 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 SNORD65B-201ENST00000459126 73 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 SNORA48.11-201ENST00000517015 89 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 AL356280.1-201ENST00000603614 379 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 AC093732.2-201ENST00000607950 274 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 AC013791.1-201ENST00000616619 62 ntBASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
KCMF1Q9P0J7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.464-201ENST00000384282 110 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 BMS1P22-201ENST00000414726 313 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 RPL23AP7-203ENST00000449021 469 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 AP001486.1-201ENST00000463339 476 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 RNU6-1219P-201ENST00000516143 112 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 RNU6-991P-201ENST00000516168 107 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 EIF4BP1-201ENST00000554881 351 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 MIR3117-201ENST00000584034 78 ntBASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.76□□□□□ -1.97
KCMF1Q9P0J7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 AC096644.4-201ENST00000563417 2912 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 RNU6-774P-201ENST00000363238 107 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 RNU6-407P-201ENST00000365280 104 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 RNU6-851P-201ENST00000384565 107 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 RNU4-61P-201ENST00000411243 107 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 Z96811.1-201ENST00000445880 108 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 RNU6-498P-201ENST00000459468 107 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 AL049873.1-201ENST00000480540 376 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 AC010598.1-201ENST00000510378 103 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 AC091826.1-201ENST00000514065 313 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 AC025647.1-201ENST00000517879 253 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 U6.106-201ENST00000636360 105 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 AC068700.1-201ENST00000565862 3754 ntBASIC2.75□□□□□ -1.97
KCMF1Q9P0J7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 SNORA27.1-201ENST00000362604 124 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU6-899P-201ENST00000363947 107 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU4-10P-201ENST00000364383 140 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU4-17P-201ENST00000365598 141 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.435-201ENST00000384095 112 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.571-201ENST00000384753 98 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 MIR634-201ENST00000385208 97 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU2-2P-201ENST00000410396 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 HSPE1P21-201ENST00000438283 308 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 AL137159.1-201ENST00000452808 512 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU7-141P-201ENST00000459304 62 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 AC010531.2-201ENST00000465012 153 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU6-1337P-201ENST00000516525 95 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU6-255P-201ENST00000516957 105 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 AC107016.2-201ENST00000547968 190 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU2-4P-201ENST00000606190 192 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.15-201ENST00000611544 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.16-201ENST00000613119 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.12-201ENST00000613778 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.9-201ENST00000615427 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.11-201ENST00000616345 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.2-201ENST00000616535 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.3-201ENST00000617785 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.19-201ENST00000618602 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 RNU2-1-201ENST00000618664 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.6-201ENST00000619225 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.5-201ENST00000619465 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 U2.10-201ENST00000620268 191 ntBASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms