Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 AC027419.1-201ENST00000522976 328 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 AC023157.2-201ENST00000540596 141 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 AC093023.1-201ENST00000547375 507 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 AC068338.1-201ENST00000565567 176 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 AC018462.2-201ENST00000605375 395 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 AL357075.2-201ENST00000614906 189 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 MTND5P16-201ENST00000460269 1703 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 RNU1-17P-201ENST00000363022 152 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.184-201ENST00000363884 108 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 MRPL42P3-201ENST00000401492 326 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 EIF1P2-201ENST00000428233 350 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 USP9YP16-201ENST00000430287 407 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 USP9YP23-201ENST00000455085 407 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.683-201ENST00000516508 93 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.706-201ENST00000516933 99 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 AP003033.1-201ENST00000527244 415 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 AC004584.2-201ENST00000570407 410 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 MIR4303-201ENST00000581299 66 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 MIR4438-201ENST00000585271 93 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 AC100812.1-201ENST00000607622 580 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 AC093913.1-201ENST00000614178 329 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 AC007014.2-201ENST00000615581 479 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.05□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-950P-201ENST00000384651 107 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 MIR329-1-201ENST00000385028 80 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 AL355796.1-201ENST00000406706 323 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 MIR548K-201ENST00000408406 116 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 MIR548F5-201ENST00000408421 86 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 MIR1277-201ENST00000408536 78 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.594-201ENST00000410373 140 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 RN7SKP200-201ENST00000410564 320 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 ELOCP21-201ENST00000412558 336 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 AL139396.1-201ENST00000421137 167 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 MRPS10P1-201ENST00000448483 130 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 AC009474.2-201ENST00000451383 136 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 U8.22-201ENST00000459141 133 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.670-201ENST00000516255 105 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-165P-201ENST00000517170 99 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 AC019288.1-201ENST00000557918 224 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 MIR3664-201ENST00000579074 99 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 AC002553.4-201ENST00000616896 331 ntBASIC1.04□□□□□ -2.24
KCNIP1Q9NZI2 RNA5SP361-201ENST00000362686 118 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-1266P-201ENST00000362794 105 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 RNU5F-3P-201ENST00000363767 117 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 MIR190B-201ENST00000401119 79 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AL591806.2-201ENST00000433122 173 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 RPS3AP52-201ENST00000435639 297 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 PGBD4P5-201ENST00000445958 426 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AC010469.2-201ENST00000496412 480 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AC046134.1-201ENST00000514454 666 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-107P-201ENST00000516643 102 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-1016P-201ENST00000516689 94 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AC105029.1-201ENST00000520250 669 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 APOOP3-201ENST00000536787 586 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 RAB11AP2-201ENST00000545905 639 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AC073413.2-201ENST00000604332 360 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AL021879.1-201ENST00000611756 288 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 AC073869.6-201ENST00000640656 341 ntBASIC1.03□□□□□ -2.24
KCNIP1Q9NZI2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 Y_RNA.6-201ENST00000362350 114 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 RNU6-457P-201ENST00000363999 107 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 Y_RNA.339-201ENST00000365325 102 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 TOMM22P2-201ENST00000430735 237 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 AC092991.1-201ENST00000477176 376 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 RPS27P22-201ENST00000478056 241 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 AP002001.1-203ENST00000534002 267 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 AC018630.2-201ENST00000534866 2403 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 MIR4421-201ENST00000578133 69 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 AC068137.4-201ENST00000638485 296 ntBASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
KCNIP1Q9NZI2 RNU1-22P-201ENST00000363334 158 ntBASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 SNORA20B-201ENST00000384220 132 ntBASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 RNU6-1145P-201ENST00000384246 107 ntBASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 RNU6-505P-201ENST00000384427 107 ntBASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 Y_RNA.557-201ENST00000384680 107 ntBASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 RNU6-1050P-201ENST00000410388 107 ntBASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 MTND3P8-201ENST00000412909 339 ntBASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 AL353997.1-201ENST00000432936 108 ntBASIC1.01□□□□□ -2.25
KCNIP1Q9NZI2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms