Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.8□□□□□ -2.12
SPHK1Q9NYA1 AC011406.1-201ENST00000512440 370 ntBASIC1.8□□□□□ -2.12
SPHK1Q9NYA1 RNU4-77P-201ENST00000516692 156 ntBASIC1.8□□□□□ -2.12
SPHK1Q9NYA1 RNU6-295P-201ENST00000516901 104 ntBASIC1.8□□□□□ -2.12
SPHK1Q9NYA1 DEFB122-202ENST00000569013 197 ntBASIC1.8□□□□□ -2.12
SPHK1Q9NYA1 MIR4299-201ENST00000577899 72 ntBASIC1.8□□□□□ -2.12
SPHK1Q9NYA1 MIR5094-201ENST00000578766 85 ntBASIC1.8□□□□□ -2.12
SPHK1Q9NYA1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 Y_RNA.252-201ENST00000364556 101 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 SNORD42.2-201ENST00000365570 69 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 MIR764-201ENST00000390811 85 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 MIR1185-2-201ENST00000408687 86 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 ELOCP21-201ENST00000412558 336 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 PCNPP5-201ENST00000452246 481 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 RNU6-625P-201ENST00000459412 107 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 RNA5SP57-201ENST00000459463 123 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 RPS29P11-201ENST00000496507 171 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 RNU6-408P-201ENST00000515910 100 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 AC018448.1-201ENST00000552843 316 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 AL442163.3-201ENST00000554110 156 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 MIR3124-201ENST00000582636 67 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 SNORD58B-201ENST00000607313 66 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 AL773524.1-201ENST00000614065 229 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 AC091925.1-201ENST00000623204 462 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SPHK1Q9NYA1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 Y_RNA.39-201ENST00000362620 98 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 SNORA33-201ENST00000363664 130 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 RNU6-474P-201ENST00000384243 107 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 RNU6-417P-201ENST00000384712 107 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 CYCSP49-201ENST00000420810 319 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AC018865.2-201ENST00000423631 129 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 MTND1P14-201ENST00000427400 950 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 MTCO2P12-201ENST00000427426 682 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AL160004.2-201ENST00000432935 350 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AL591806.2-201ENST00000433122 173 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AC099677.2-201ENST00000436385 175 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AL137792.2-201ENST00000443484 235 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 snoU13.23-201ENST00000458863 104 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AC010469.2-201ENST00000496412 480 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 RNU6-1153P-201ENST00000516760 105 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AC025647.1-201ENST00000517879 253 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AP002001.1-203ENST00000534002 267 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 HSBP1P1-201ENST00000555205 166 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 MIR5188-201ENST00000583467 113 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.78□□□□□ -2.12
SPHK1Q9NYA1 RNU6-961P-201ENST00000363893 105 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 Y_RNA.216-201ENST00000364205 93 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 SNORA26.9-201ENST00000391322 122 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 MIR1253-201ENST00000408273 105 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 RAB28P5-201ENST00000427490 651 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 Y_RNA.639-201ENST00000458981 102 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 RNU6-221P-201ENST00000459541 99 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 MIR2355-201ENST00000517199 87 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 RN7SKP295-201ENST00000517264 153 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 MIR4524B-201ENST00000581569 115 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 AC005786.1-201ENST00000588553 154 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 VN1R91P-201ENST00000594377 169 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 U6.92-201ENST00000636464 89 ntBASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
SPHK1Q9NYA1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 AC091812.1-201ENST00000432235 1948 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 RNU1-96P-201ENST00000364163 162 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 RNY3P4-201ENST00000384428 101 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 SNORA48.1-201ENST00000390879 135 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 MCFD2P1-201ENST00000417812 300 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 PMCHL1-202ENST00000423102 261 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 MTND2P29-201ENST00000438595 412 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
SPHK1Q9NYA1 RNU6-548P-201ENST00000517083 115 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms