Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 Y_RNA.327-201ENST00000365201 102 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 Y_RNA.330-201ENST00000365230 109 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 MIR508-201ENST00000384857 115 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 MTND4P18-201ENST00000447010 465 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 snoU13.23-201ENST00000458863 104 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 RNU6-261P-201ENST00000459506 102 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 AC091885.1-201ENST00000506658 268 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 RNU6-113P-201ENST00000516653 101 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 AC015712.3-201ENST00000559380 164 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 AC023827.1-201ENST00000569247 97 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 AC131055.1-201ENST00000584626 316 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 AL158209.2-201ENST00000619266 216 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 ELL2P3-201ENST00000457883 1602 ntBASIC0.45□□□□□ -2.34
VCX3AQ9NNX9 AC121333.1-201ENST00000567488 2709 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 SNORA69-201ENST00000383895 132 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 RNU6-1080P-201ENST00000383982 107 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 MIR10B-201ENST00000385011 110 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 MIR153-2-201ENST00000385225 87 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 SNORD89-201ENST00000390981 114 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 CALM2P3-201ENST00000400429 449 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC092473.1-201ENST00000441098 221 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 MTND3P16-201ENST00000452205 344 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 RNU6-956P-201ENST00000458868 103 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC091021.1-201ENST00000468051 388 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC107401.1-201ENST00000503426 685 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 RN7SKP298-201ENST00000515950 94 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 RNU2-56P-201ENST00000516826 190 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 RNU6-1198P-201ENST00000516904 67 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC022868.1-201ENST00000517767 391 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC104383.1-201ENST00000530297 370 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC026371.1-201ENST00000551867 419 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 FAM106DP-201ENST00000586416 501 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 AC097520.1-201ENST00000624435 385 ntBASIC0.44□□□□□ -2.34
VCX3AQ9NNX9 SNORA1B-201ENST00000362535 133 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 Y_RNA.267-201ENST00000364679 109 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RNU6-793P-201ENST00000384233 104 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RNU6-790P-201ENST00000384479 105 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RNU6-648P-201ENST00000410190 107 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AL162725.1-201ENST00000435405 301 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AL353572.1-201ENST00000442490 417 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RN7SL429P-201ENST00000479090 223 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RN7SL489P-201ENST00000486185 223 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RN7SL327P-201ENST00000488659 223 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 MTCO2P30-201ENST00000503662 364 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AC097462.1-201ENST00000514125 324 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RNU7-28P-201ENST00000516759 62 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RNU6-835P-201ENST00000516974 104 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 Y_RNA.717-201ENST00000517106 92 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RNU7-172P-201ENST00000517125 64 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 UBL5P4-201ENST00000562584 236 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RN7SL853P-201ENST00000617250 223 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AC006504.8-201ENST00000621046 635 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 7SK.10-201ENST00000621414 298 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AC023510.2-201ENST00000622162 746 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 Z69908.1-201ENST00000622603 247 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 AC006435.5-201ENST00000624486 112 ntBASIC0.43□□□□□ -2.34
VCX3AQ9NNX9 RNA5SP264-201ENST00000363115 107 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 Y_RNA.140-201ENST00000363474 103 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 Y_RNA.151-201ENST00000363566 112 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 RNU6-1322P-201ENST00000364309 107 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 Y_RNA.231-201ENST00000364358 102 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 RNU6-128P-201ENST00000383976 107 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC092447.3-201ENST00000426027 686 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 Z82205.1-201ENST00000428456 297 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 DAP3P1-201ENST00000441522 278 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 U7.7-201ENST00000459276 60 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AP000870.1-201ENST00000472927 406 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC083904.1-201ENST00000487828 231 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 RPL30P10-201ENST00000488148 337 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 RNU6-1116P-201ENST00000517269 99 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC091144.1-201ENST00000519573 138 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC109810.1-201ENST00000534066 224 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC004812.1-201ENST00000540773 146 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 MTND1P15-201ENST00000579262 949 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC091178.2-201ENST00000584401 117 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 PIGPP4-201ENST00000584447 307 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC009248.2-201ENST00000619826 254 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 AC244015.1-201ENST00000622301 99 ntBASIC0.42□□□□□ -2.34
VCX3AQ9NNX9 Y_RNA.184-201ENST00000363884 108 ntBASIC0.41□□□□□ -2.34
VCX3AQ9NNX9 RNU6-280P-201ENST00000364145 104 ntBASIC0.41□□□□□ -2.34
VCX3AQ9NNX9 Y_RNA.582-201ENST00000391023 95 ntBASIC0.41□□□□□ -2.34
VCX3AQ9NNX9 RNU6-159P-201ENST00000391080 106 ntBASIC0.41□□□□□ -2.34
VCX3AQ9NNX9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.41□□□□□ -2.34
VCX3AQ9NNX9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.41□□□□□ -2.34
VCX3AQ9NNX9 MTCO3P19-201ENST00000415864 321 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms