Protein–RNA interactions for Protein: Q9GZU3

TMEM39B, Transmembrane protein 39B, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39BQ9GZU3 CBX3P4-201ENST00000538909 354 ntBASIC2□□□□□ -2.09
TMEM39BQ9GZU3 AC121758.2-201ENST00000553271 193 ntBASIC2□□□□□ -2.09
TMEM39BQ9GZU3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2□□□□□ -2.09
TMEM39BQ9GZU3 AL645939.4-201ENST00000604495 135 ntBASIC2□□□□□ -2.09
TMEM39BQ9GZU3 SNORD58B-201ENST00000607313 66 ntBASIC2□□□□□ -2.09
TMEM39BQ9GZU3 MIR7111-201ENST00000619751 72 ntBASIC2□□□□□ -2.09
TMEM39BQ9GZU3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 AL159152.1-201ENST00000635019 2587 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 MIR337-201ENST00000362281 93 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 Y_RNA.39-201ENST00000362620 98 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 MIR1283-2-201ENST00000408621 87 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 MIR2355-201ENST00000517199 87 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 AL442163.3-201ENST00000554110 156 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 HSBP1P1-201ENST00000555205 166 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 VN1R91P-201ENST00000594377 169 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 AC083806.3-201ENST00000614016 455 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 MIR203B-201ENST00000636080 86 ntBASIC1.99□□□□□ -2.09
TMEM39BQ9GZU3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 Y_RNA.11-201ENST00000362375 109 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 RNA5SP276-201ENST00000362580 94 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 Y_RNA.216-201ENST00000364205 93 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 SNORA40.19-201ENST00000390846 128 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC060773.1-201ENST00000421698 310 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 PMCHL1-202ENST00000423102 261 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC074290.1-201ENST00000448883 135 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 Y_RNA.631-201ENST00000459607 101 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC067942.3-201ENST00000512025 362 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 RN7SKP295-201ENST00000517264 153 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 MIR3169-201ENST00000578032 83 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 MIR4529-201ENST00000578110 78 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 MIR5188-201ENST00000583467 113 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC011476.5-201ENST00000615594 130 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC006001.4-201ENST00000622243 395 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC022140.2-201ENST00000623500 188 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AC008873.1-201ENST00000625051 138 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 AL606534.2-204ENST00000635008 178 ntBASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.98□□□□□ -2.09
TMEM39BQ9GZU3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 AC091812.1-201ENST00000432235 1948 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 AL596028.1-201ENST00000326971 197 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 U3.8-201ENST00000363675 217 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 RNU1-115P-201ENST00000365329 160 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 ELOCP21-201ENST00000412558 336 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 MCFD2P1-201ENST00000417812 300 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 AL357134.1-201ENST00000445848 426 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 MTND4P19-201ENST00000446659 478 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 SNORA40.9-201ENST00000515895 93 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 RNU6-408P-201ENST00000515910 100 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 RNU2-19P-201ENST00000517288 84 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 AC018448.1-201ENST00000552843 316 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 AL512598.1-201ENST00000610158 273 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 snoZ196.1-201ENST00000625269 89 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 AC134503.1-201ENST00000633048 54 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
TMEM39BQ9GZU3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 RNY1P10-201ENST00000363268 113 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 Y_RNA.128-201ENST00000363391 112 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 RNA5SP450-201ENST00000411206 102 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 AL354751.2-201ENST00000415471 210 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 MTND1P14-201ENST00000427400 950 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 RNU1-131P-201ENST00000458943 161 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 AC010469.2-201ENST00000496412 480 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 AC007229.1-201ENST00000590455 412 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.96□□□□□ -2.1
TMEM39BQ9GZU3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 RNU1-42P-201ENST00000364033 160 ntBASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 SNORA6-201ENST00000384033 151 ntBASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 AL355497.1-201ENST00000406262 551 ntBASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 MIR548P-201ENST00000408336 84 ntBASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 MIR1185-2-201ENST00000408687 86 ntBASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 AC096920.1-201ENST00000423991 241 ntBASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.95□□□□□ -2.1
TMEM39BQ9GZU3 RNU6-625P-201ENST00000459412 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms