Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC027288.2-201ENST00000553028 243 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 UBL5P4-201ENST00000562584 236 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 AC011195.1-201ENST00000578177 177 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.3□□□□□ -2.36
NKX6-2Q9C056 AC087683.1-201ENST00000591187 441 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 7SK.7-201ENST00000603504 247 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 AC017083.3-201ENST00000609955 700 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 AC007014.2-201ENST00000615581 479 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 Y_RNA.184-201ENST00000363884 108 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 RNU6-82P-201ENST00000363970 107 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 RNA5SP222-201ENST00000411039 105 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 RPL30P16-201ENST00000419341 429 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AL353193.1-201ENST00000421444 268 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 RPL23AP50-201ENST00000434149 455 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AC092628.1-201ENST00000436250 252 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 U7.7-201ENST00000459276 60 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AC107401.1-201ENST00000503426 685 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 RNA5SP401-201ENST00000515920 127 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 RNU7-28P-201ENST00000516759 62 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 MTND4LP26-201ENST00000518144 282 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AC091144.1-201ENST00000519573 138 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AC104383.1-201ENST00000530297 370 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AP002004.2-201ENST00000531656 154 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AC025627.3-201ENST00000582078 182 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 Z83818.1-201ENST00000603584 150 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AL133215.3-201ENST00000609801 448 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 SEPT14P17-201ENST00000617978 177 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AC006504.8-201ENST00000621046 635 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 AC100810.6-201ENST00000638068 285 ntBASIC0.29□□□□□ -2.36
NKX6-2Q9C056 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
NKX6-2Q9C056 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
NKX6-2Q9C056 RNU4-9P-201ENST00000364951 139 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 Y_RNA.336-201ENST00000365307 109 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU4-20P-201ENST00000365601 151 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU5A-6P-201ENST00000384136 116 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU6-793P-201ENST00000384233 104 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU6-541P-201ENST00000384709 110 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU6-376P-201ENST00000384731 106 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU1-119P-201ENST00000391122 165 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNA5SP482-201ENST00000391269 118 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 MTCO3P19-201ENST00000415864 321 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AC244098.3-201ENST00000424803 96 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 MTCO2P19-201ENST00000427513 598 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AL606489.2-201ENST00000433886 234 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU7-187P-201ENST00000458985 68 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AP000870.1-201ENST00000472927 406 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 Y_RNA.654-201ENST00000497848 106 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AC091885.1-201ENST00000506658 268 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU6-107P-201ENST00000516643 102 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RNU6-341P-201ENST00000516973 96 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 RPL21P9-201ENST00000556149 474 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 CYP3A137P-201ENST00000562436 69 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.28□□□□□ -2.36
NKX6-2Q9C056 Z94722.1-201ENST00000604328 474 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AC092807.2-201ENST00000609367 243 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AC109347.2-201ENST00000610220 349 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AC093913.1-201ENST00000614178 329 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
NKX6-2Q9C056 FAM157A-202ENST00000615155 405 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AL158209.2-201ENST00000619266 216 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AC091931.1-201ENST00000623488 728 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AC006435.5-201ENST00000624486 112 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 AL008636.1-201ENST00000625038 1018 ntBASIC0.28□□□□□ -2.36
NKX6-2Q9C056 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.27□□□□□ -2.37
NKX6-2Q9C056 SNORD115-32-201ENST00000364079 82 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 RNU6-790P-201ENST00000384479 105 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 MIR153-2-201ENST00000385225 87 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 RNU6-994P-201ENST00000410507 111 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 ZNF885P-201ENST00000420174 1098 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 MTCO2P12-201ENST00000427426 682 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.27□□□□□ -2.37
NKX6-2Q9C056 AC018710.1-201ENST00000506509 158 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 AC010598.1-201ENST00000510378 103 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 RNU4-57P-201ENST00000515980 135 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 AC023442.1-201ENST00000531247 422 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
NKX6-2Q9C056 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.27□□□□□ -2.37
NKX6-2Q9C056 AC010620.1-201ENST00000601088 1102 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 MIR5087-201ENST00000635826 76 ntBASIC0.27□□□□□ -2.37
NKX6-2Q9C056 Y_RNA.169-201ENST00000363745 96 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 RNU6-407P-201ENST00000365280 104 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 RNU6-38P-201ENST00000384085 107 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 MIR891A-201ENST00000401237 79 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 MIR1185-1-201ENST00000408598 86 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AC018865.2-201ENST00000423631 129 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 PIGPP3-201ENST00000425307 415 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AL353572.1-201ENST00000442490 417 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AC067940.1-201ENST00000458411 300 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 SNORA40.12-201ENST00000516329 111 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 RNU6-1110P-201ENST00000516462 101 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 RNU6-1198P-201ENST00000516904 67 ntBASIC0.26□□□□□ -2.37
NKX6-2Q9C056 AP001372.4-201ENST00000524889 472 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms