Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AP000811.1-201ENST00000603803 651 ntBASIC0.03□□□□□ -2.4
TRIM4Q9C037 AC100812.1-201ENST00000607622 580 ntBASIC0.03□□□□□ -2.4
TRIM4Q9C037 AC091304.9-201ENST00000612091 226 ntBASIC0.03□□□□□ -2.4
TRIM4Q9C037 AL133173.2-201ENST00000614270 90 ntBASIC0.03□□□□□ -2.4
TRIM4Q9C037 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
TRIM4Q9C037 MIR411-201ENST00000362239 96 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 MIR101-1-201ENST00000362265 75 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 SNORD44.1-201ENST00000363202 61 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 RNU6-1029P-201ENST00000384109 107 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 RNU6-1127P-201ENST00000384580 107 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 MIR454-201ENST00000390180 115 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 RNU6-994P-201ENST00000410507 111 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 MTCO2P34-201ENST00000421994 607 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 MTCO2P3-201ENST00000442543 421 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 RNU6-344P-201ENST00000516635 111 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 RNU6-612P-201ENST00000516909 102 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 RNU6-410P-201ENST00000517006 107 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 AC069113.1-201ENST00000517763 267 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 MTCO3P23-201ENST00000561363 289 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 RNU6-85P-201ENST00000605989 107 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 AC027807.2-201ENST00000616099 408 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 AC005592.1-201ENST00000566527 1640 ntBASIC0.02□□□□□ -2.41
TRIM4Q9C037 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
TRIM4Q9C037 SNORA25.3-201ENST00000363205 127 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 RNU4-45P-201ENST00000365469 141 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 MIR1827-201ENST00000408549 66 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.01□□□□□ -2.41
TRIM4Q9C037 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.01□□□□□ -2.41
TRIM4Q9C037 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.01□□□□□ -2.41
TRIM4Q9C037 RNU7-182P-201ENST00000459009 62 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 RPS29P27-201ENST00000463711 170 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 AC104692.1-201ENST00000472406 90 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 AC010469.2-201ENST00000496412 480 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 AC091951.3-201ENST00000504093 246 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 AF235103.2-201ENST00000525753 346 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.01□□□□□ -2.41
TRIM4Q9C037 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.01□□□□□ -2.41
TRIM4Q9C037 BNIP3P39-201ENST00000601077 554 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 AL157392.4-201ENST00000609756 345 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 SCARNA4-201ENST00000629045 128 ntBASIC0.01□□□□□ -2.41
TRIM4Q9C037 RNU6-227P-201ENST00000362865 103 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 RNU6-74P-201ENST00000384235 107 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 RNU6-1297P-201ENST00000384415 104 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 MIR214-201ENST00000385214 110 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 PDCL2P1-201ENST00000419302 352 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 HMGN2P22-201ENST00000427588 175 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0□□□□□ -2.41
TRIM4Q9C037 AC084290.1-201ENST00000434995 374 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 RPS29P15-201ENST00000458329 171 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 Y_RNA.700-201ENST00000516806 100 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 AC022878.1-201ENST00000530684 149 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 MIR4999-201ENST00000585029 91 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 RNU4-5P-201ENST00000607255 135 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 SEPT14P19-203ENST00000633205 211 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 MIR6079-201ENST00000635807 62 ntBASIC0□□□□□ -2.41
TRIM4Q9C037 MIRLET7C-201ENST00000362160 84 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 SNORD111-201ENST00000408139 94 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.01□□□□□ -2.41
TRIM4Q9C037 USP9YP12-201ENST00000450481 570 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 SNORD27.1-201ENST00000516319 72 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 Vault.3-201ENST00000516676 95 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 RNU7-28P-201ENST00000516759 62 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 RNU2-46P-201ENST00000517038 113 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 RNU6-58P-201ENST00000517143 103 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 MIR4438-201ENST00000585271 93 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.01□□□□□ -2.41
TRIM4Q9C037 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.01□□□□□ -2.41
TRIM4Q9C037 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
TRIM4Q9C037 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 RNU6-137P-201ENST00000363680 108 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 MIR1185-2-201ENST00000408687 86 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 AL512286.1-201ENST00000439244 400 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 AC079781.2-201ENST00000446424 169 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRIM4Q9C037 SCARNA18-201ENST00000459004 134 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 RNU2-56P-201ENST00000516826 190 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 MTND2P32-201ENST00000521584 1038 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 AC141557.1-201ENST00000540982 400 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 AC026371.1-201ENST00000551867 419 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 AC027288.2-201ENST00000553028 243 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 RMST_3.1-201ENST00000611651 109 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 AL357075.2-201ENST00000614906 189 ntBASIC-0.02□□□□□ -2.41
TRIM4Q9C037 ZNF204P-201ENST00000416749 2397 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 MTND4P4-201ENST00000439033 1366 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
TRIM4Q9C037 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 CALM2P3-201ENST00000400429 449 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 MIR320B2-201ENST00000408479 138 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRIM4Q9C037 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.03□□□□□ -2.41
TRIM4Q9C037 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.03□□□□□ -2.41
TRIM4Q9C037 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 308.1 ms