Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MIR5004-201ENST00000579078 107 ntBASIC3.22□□□□□ -1.89
FOXP3Q9BZS1 AC103810.1-201ENST00000579873 453 ntBASIC3.22□□□□□ -1.89
FOXP3Q9BZS1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
FOXP3Q9BZS1 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
FOXP3Q9BZS1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.22□□□□□ -1.89
FOXP3Q9BZS1 MIR3658-201ENST00000636291 56 ntBASIC3.22□□□□□ -1.89
FOXP3Q9BZS1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
FOXP3Q9BZS1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.22□□□□□ -1.89
FOXP3Q9BZS1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
FOXP3Q9BZS1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 Y_RNA.124-201ENST00000363339 93 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 Y_RNA.229-201ENST00000364347 113 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 RNU6-1228P-201ENST00000391014 107 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 MIR300-201ENST00000401138 83 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 MIR513C-201ENST00000401352 84 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 AL355796.1-201ENST00000406706 323 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 MIR1283-1-201ENST00000408494 87 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 AC008267.6-201ENST00000441664 139 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 RPS27P26-201ENST00000494583 239 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 SNORA25.12-201ENST00000516202 82 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 MIR4724-201ENST00000579485 89 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 MIR4765-201ENST00000585007 77 ntBASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXP3Q9BZS1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 MIR367-201ENST00000362299 68 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 U8.7-201ENST00000364940 136 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 MTND4LP9-201ENST00000427694 174 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 RNA5SP112-201ENST00000515937 99 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 RNU7-115P-201ENST00000516433 55 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 MIR548AY-201ENST00000617669 107 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 AC012640.5-201ENST00000623897 319 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 AC006386.2-201ENST00000624491 75 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 AC012005.1-201ENST00000624575 75 ntBASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXP3Q9BZS1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 Y_RNA.81-201ENST00000362997 102 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 SNORA14A-201ENST00000364773 135 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 RNU6-643P-201ENST00000384018 107 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 SNORA20B-201ENST00000384220 132 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 MT-TT-201ENST00000387460 66 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 MIR1294-201ENST00000408503 142 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 AC006461.1-201ENST00000412637 326 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 AL121890.1-201ENST00000435457 205 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 HSPE1P21-201ENST00000438283 308 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 AL121914.1-201ENST00000450188 156 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 RNU7-57P-201ENST00000459540 60 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 EIF4BP1-201ENST00000554881 351 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 AC090517.3-201ENST00000625170 141 ntBASIC3.19□□□□□ -1.9
FOXP3Q9BZS1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 SNORA27.1-201ENST00000362604 124 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 MIR15B-201ENST00000385045 98 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 RNA5SP354-201ENST00000391247 136 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 AL606845.1-201ENST00000404881 255 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 Y_RNA.629-201ENST00000411368 105 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 AC009414.1-201ENST00000427200 443 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 AL137159.1-201ENST00000452808 512 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 RNU7-14P-201ENST00000459331 62 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 AC114982.1-201ENST00000469402 321 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 RN7SL633P-201ENST00000488974 297 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 RNU6-1337P-201ENST00000516525 95 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 MIR6852-201ENST00000621699 66 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 snoZ196.1-201ENST00000625269 89 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 AC068647.2-201ENST00000637380 353 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 AL035425.3-201ENST00000564206 4996 ntBASIC3.18□□□□□ -1.9
FOXP3Q9BZS1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 MIR422A-201ENST00000362286 90 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RNU6-199P-201ENST00000362954 107 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RNU6-486P-201ENST00000363116 107 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RNU6-271P-201ENST00000363858 105 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RNA5SP205-201ENST00000364653 136 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 U8.9-201ENST00000365667 134 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 MIR518C-201ENST00000384822 101 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 SNORA36B-201ENST00000410438 131 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RNU6-221P-201ENST00000459541 99 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms