Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC096725.1-201ENST00000514266 313 ntBASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 RNY3P16-201ENST00000516338 101 ntBASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 RNU6-56P-201ENST00000516986 93 ntBASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 MIR3144-201ENST00000579460 79 ntBASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 AC004832.4-201ENST00000608952 331 ntBASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRFN3Q9BTN0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 SNORD114-30-201ENST00000364448 72 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 RNU6-394P-201ENST00000410735 107 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 POLR2KP2-201ENST00000438155 177 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 AC009969.1-201ENST00000438726 172 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 CENPBD1P1-201ENST00000464061 469 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 RN7SL442P-201ENST00000473804 320 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 AC104465.1-201ENST00000611365 139 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 AL357075.2-201ENST00000614906 189 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 AC006001.4-201ENST00000622243 395 ntBASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LRFN3Q9BTN0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 RNU1-62P-201ENST00000362599 164 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 RNU6-704P-201ENST00000364162 103 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AP002088.1-201ENST00000382740 395 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 RNU6-546P-201ENST00000383991 107 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AC009237.7-201ENST00000447357 229 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 UQCRBP2-201ENST00000447827 297 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AC007395.1-201ENST00000451333 677 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AC103975.1-201ENST00000482506 483 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 SNORA31.26-201ENST00000517250 137 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AC055872.1-201ENST00000570978 278 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 MIR4308-201ENST00000580634 81 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 MIR4506-201ENST00000584693 77 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AC005176.2-201ENST00000596933 147 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 AC073349.3-201ENST00000617616 186 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 U4atac.1-201ENST00000618345 95 ntBASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LRFN3Q9BTN0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 RNU1-75P-201ENST00000347264 129 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 Y_RNA.8-201ENST00000362353 102 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 Y_RNA.308-201ENST00000365043 101 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 SNORD50.2-201ENST00000365465 70 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AC027124.2-201ENST00000428249 105 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AC104389.3-201ENST00000445629 235 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 RNU6-1219P-201ENST00000516143 112 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 MIR548AI-201ENST00000579940 88 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AC090616.3-201ENST00000582184 217 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AC022441.3-201ENST00000605737 136 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AC005828.6-201ENST00000606610 232 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AC010999.1-201ENST00000611856 324 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 AC007318.2-201ENST00000620999 243 ntBASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.84□□□□□ -1.95
LRFN3Q9BTN0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.84□□□□□ -1.96
LRFN3Q9BTN0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 RNU6-873P-201ENST00000363833 107 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 Y_RNA.217-201ENST00000364214 105 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 Y_RNA.398-201ENST00000383952 99 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 Y_RNA.435-201ENST00000384095 112 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 RNU6-1135P-201ENST00000411083 103 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 Y_RNA.641-201ENST00000459414 105 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 RNA5SP385-201ENST00000515947 110 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 RNU6-966P-201ENST00000516479 104 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 RNU6-344P-201ENST00000516635 111 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 RNU2-44P-201ENST00000516795 194 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 AC022616.8-201ENST00000533569 253 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 MIR5006-201ENST00000583027 110 ntBASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LRFN3Q9BTN0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms