Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LRRC34P1-201ENST00000542742 915 ntBASIC-0.92□□□□□ -2.56
ABCA3Q99758 MIR3146-201ENST00000580367 79 ntBASIC-0.92□□□□□ -2.56
ABCA3Q99758 AP002360.4-201ENST00000606980 481 ntBASIC-0.92□□□□□ -2.56
ABCA3Q99758 AC010999.1-201ENST00000611856 324 ntBASIC-0.92□□□□□ -2.56
ABCA3Q99758 RNU6-580P-201ENST00000365159 107 ntBASIC-0.93□□□□□ -2.56
ABCA3Q99758 RNA5SP117-201ENST00000365294 118 ntBASIC-0.93□□□□□ -2.56
ABCA3Q99758 SNORA26.3-201ENST00000391119 136 ntBASIC-0.93□□□□□ -2.56
ABCA3Q99758 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.93□□□□□ -2.56
ABCA3Q99758 RNU6-221P-201ENST00000459541 99 ntBASIC-0.93□□□□□ -2.56
ABCA3Q99758 AC107401.1-201ENST00000503426 685 ntBASIC-0.93□□□□□ -2.56
ABCA3Q99758 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.93□□□□□ -2.56
ABCA3Q99758 AC023050.3-201ENST00000541142 333 ntBASIC-0.93□□□□□ -2.56
ABCA3Q99758 NAMPTP3-201ENST00000569273 224 ntBASIC-0.93□□□□□ -2.56
ABCA3Q99758 MIR4436A-201ENST00000585278 85 ntBASIC-0.93□□□□□ -2.56
ABCA3Q99758 MIRLET7C-201ENST00000362160 84 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 RNU6-10P-201ENST00000384036 107 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 RNU6-364P-201ENST00000384387 107 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 RNU6-15P-201ENST00000384534 107 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 MIR562-201ENST00000384894 95 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 MIR454-201ENST00000390180 115 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 RNA5SP163-201ENST00000410304 99 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 AC007327.1-201ENST00000447461 264 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 RNU7-41P-201ENST00000515917 61 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 AC025647.1-201ENST00000517879 253 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.94□□□□□ -2.56
ABCA3Q99758 AC006504.8-201ENST00000621046 635 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 AC068792.1-201ENST00000621354 417 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 AC027279.3-201ENST00000625055 122 ntBASIC-0.94□□□□□ -2.56
ABCA3Q99758 MIR16-2-201ENST00000362117 81 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 RNU2-3P-201ENST00000410144 191 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 Z98949.2-201ENST00000440996 144 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 RNU7-43P-201ENST00000516554 64 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 MIR499B-201ENST00000636498 73 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 MIR1302-7-201ENST00000408841 72 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.95□□□□□ -2.56
ABCA3Q99758 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.95□□□□□ -2.56
ABCA3Q99758 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.95□□□□□ -2.56
ABCA3Q99758 MTCO3P27-201ENST00000514397 196 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 AL596327.1-201ENST00000603629 213 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 AC097478.2-201ENST00000610572 514 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 snoZ196.1-201ENST00000625269 89 ntBASIC-0.95□□□□□ -2.56
ABCA3Q99758 SNORD32A-201ENST00000364805 84 ntBASIC-0.96□□□□□ -2.56
ABCA3Q99758 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.96□□□□□ -2.56
ABCA3Q99758 MIR586-201ENST00000385035 97 ntBASIC-0.96□□□□□ -2.56
ABCA3Q99758 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.96□□□□□ -2.56
ABCA3Q99758 AC092809.3-201ENST00000415453 231 ntBASIC-0.96□□□□□ -2.56
ABCA3Q99758 MTCO1P20-201ENST00000425366 358 ntBASIC-0.96□□□□□ -2.56
ABCA3Q99758 RPS24P1-201ENST00000438550 371 ntBASIC-0.96□□□□□ -2.56
ABCA3Q99758 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.96□□□□□ -2.56
ABCA3Q99758 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.96□□□□□ -2.56
ABCA3Q99758 MIR548AC-201ENST00000585049 88 ntBASIC-0.96□□□□□ -2.56
ABCA3Q99758 MIR4788-201ENST00000639104 80 ntBASIC-0.96□□□□□ -2.56
ABCA3Q99758 SNORA36.1-201ENST00000363424 132 ntBASIC-0.97□□□□□ -2.56
ABCA3Q99758 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.97□□□□□ -2.56
ABCA3Q99758 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.97□□□□□ -2.56
ABCA3Q99758 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.97□□□□□ -2.56
ABCA3Q99758 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.97□□□□□ -2.56
ABCA3Q99758 RNU6-123P-201ENST00000516163 102 ntBASIC-0.97□□□□□ -2.56
ABCA3Q99758 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.97□□□□□ -2.56
ABCA3Q99758 MIR5708-201ENST00000579723 85 ntBASIC-0.97□□□□□ -2.56
ABCA3Q99758 AC068790.2-201ENST00000602601 557 ntBASIC-0.97□□□□□ -2.56
ABCA3Q99758 AC104260.1-201ENST00000616660 539 ntBASIC-0.97□□□□□ -2.56
ABCA3Q99758 AC098679.4-201ENST00000624241 654 ntBASIC-0.97□□□□□ -2.56
ABCA3Q99758 AC073343.1-201ENST00000328239 651 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 RNU6-552P-201ENST00000362869 119 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 RNU6-25P-201ENST00000383873 107 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 RNU6-29P-201ENST00000384637 107 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 MT-TN-201ENST00000387400 73 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AL049545.1-201ENST00000401856 572 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AC012306.1-201ENST00000423267 114 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 USP9YP11-201ENST00000427537 717 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 PCNPP5-201ENST00000452246 481 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AC107297.1-201ENST00000459991 176 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 RPS29P27-201ENST00000463711 170 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 RPL39P34-201ENST00000477141 156 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.98□□□□□ -2.57
ABCA3Q99758 AC069545.1-201ENST00000605671 358 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AC012467.1-201ENST00000607740 256 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 MIR136-201ENST00000385207 82 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AL953862.1-201ENST00000423016 168 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.98□□□□□ -2.57
ABCA3Q99758 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.98□□□□□ -2.57
ABCA3Q99758 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.98□□□□□ -2.57
ABCA3Q99758 RNU7-129P-201ENST00000516128 62 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AC087894.1-201ENST00000538359 518 ntBASIC-0.98□□□□□ -2.57
ABCA3Q99758 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.98□□□□□ -2.57
ABCA3Q99758 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.99□□□□□ -2.57
ABCA3Q99758 MTND1P4-201ENST00000435196 415 ntBASIC-0.99□□□□□ -2.57
ABCA3Q99758 AC013470.1-201ENST00000453438 462 ntBASIC-0.99□□□□□ -2.57
ABCA3Q99758 AC108729.2-201ENST00000476543 840 ntBASIC-0.99□□□□□ -2.57
ABCA3Q99758 AC091178.2-201ENST00000584401 117 ntBASIC-0.99□□□□□ -2.57
ABCA3Q99758 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.99□□□□□ -2.57
ABCA3Q99758 MIR578-201ENST00000384828 96 ntBASIC-1□□□□□ -2.57
ABCA3Q99758 SNORD83B-201ENST00000386745 93 ntBASIC-1□□□□□ -2.57
ABCA3Q99758 MIR208B-201ENST00000401172 77 ntBASIC-1□□□□□ -2.57
ABCA3Q99758 MIR1185-2-201ENST00000408687 86 ntBASIC-1□□□□□ -2.57
ABCA3Q99758 SEPT14P24-201ENST00000447236 180 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms