Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS1Q99742 AC087441.2-201ENST00000529141 262 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 AP002001.1-203ENST00000534002 267 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 AC136932.1-201ENST00000574771 208 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 MIR4300-201ENST00000581016 96 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 AC008749.1-201ENST00000597650 306 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 AC005034.5-201ENST00000604219 466 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NPAS1Q99742 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 AC009487.4-201ENST00000624969 3585 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 Y_RNA.47-201ENST00000362697 108 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 Y_RNA.276-201ENST00000364732 109 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 RNU6-806P-201ENST00000365147 105 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.18□□□□□ -2.06
NPAS1Q99742 Y_RNA.570-201ENST00000384750 101 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.18□□□□□ -2.06
NPAS1Q99742 AC060773.1-201ENST00000421698 310 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 AL731563.1-201ENST00000442202 214 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.18□□□□□ -2.06
NPAS1Q99742 AC005042.3-201ENST00000453230 174 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.18□□□□□ -2.06
NPAS1Q99742 LINC01399-202ENST00000458450 244 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 AC011406.1-201ENST00000512440 370 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 RNU7-193P-201ENST00000516723 65 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 AP003733.2-201ENST00000529409 171 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 AL117187.1-201ENST00000555482 181 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 MIR3684-201ENST00000579779 74 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 PRR13P7-201ENST00000605538 430 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 SNORD113-5-201ENST00000607261 78 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.18□□□□□ -2.06
NPAS1Q99742 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.17□□□□□ -2.06
NPAS1Q99742 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
NPAS1Q99742 MIR340-201ENST00000362125 95 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 MIR410-201ENST00000362222 80 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RNU6-454P-201ENST00000364292 107 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RNU1-51P-201ENST00000365345 176 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 Y_RNA.512-201ENST00000384518 102 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 Y_RNA.574-201ENST00000384766 95 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RNU6-1105P-201ENST00000384774 107 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 MIR518A2-201ENST00000384966 87 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 snosnR66.1-201ENST00000391095 99 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RPL21P1-201ENST00000399532 476 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 MIR1302-3-201ENST00000408128 138 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RNU2-54P-201ENST00000410299 190 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RPS12P2-201ENST00000439728 269 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 ATP5J2P3-201ENST00000451550 258 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RNU1-131P-201ENST00000458943 161 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 AC098869.1-201ENST00000481627 292 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 AC234781.5-201ENST00000508429 271 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RPL23AP94-201ENST00000512518 302 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 RNU6-570P-201ENST00000517051 105 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.17□□□□□ -2.06
NPAS1Q99742 AC022441.3-201ENST00000605737 136 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 AC103810.6-201ENST00000606708 136 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 IGHVIII-44-202ENST00000636235 289 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 U6.104-201ENST00000637979 90 ntBASIC2.17□□□□□ -2.06
NPAS1Q99742 Y_RNA.222-201ENST00000364264 102 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 RNU6-407P-201ENST00000365280 104 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 Y_RNA.500-201ENST00000384466 111 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 RNU6-417P-201ENST00000384712 107 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 MIR597-201ENST00000384968 97 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 SNORD115-46-201ENST00000390982 71 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 HMGN2P39-201ENST00000398005 273 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.16□□□□□ -2.06
NPAS1Q99742 AC096920.1-201ENST00000423991 241 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 POLR2KP2-201ENST00000438155 177 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
NPAS1Q99742 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.16□□□□□ -2.06
NPAS1Q99742 RPL23AP3-201ENST00000453844 468 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 SNORD65B-201ENST00000459126 73 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 RPS27P22-201ENST00000478056 241 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 RN7SL636P-201ENST00000497504 294 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 AC010598.1-201ENST00000510378 103 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 AL162730.1-201ENST00000605734 292 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 AC245884.12-201ENST00000615364 59 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 U6.115-201ENST00000636045 103 ntBASIC2.16□□□□□ -2.06
NPAS1Q99742 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
NPAS1Q99742 Y_RNA.26-201ENST00000362539 101 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 Y_RNA.105-201ENST00000363182 111 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 MIR1302-6-201ENST00000408466 90 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.15□□□□□ -2.07
NPAS1Q99742 AL358176.2-201ENST00000425769 204 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 HMGN2P3-201ENST00000433603 273 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 HMGN2P5-201ENST00000436882 273 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 YWHAEP4-201ENST00000505390 198 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS1Q99742 AC021269.2-201ENST00000532318 330 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.15□□□□□ -2.07
NPAS1Q99742 MIR4529-201ENST00000578110 78 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 SDR42E1P4-201ENST00000620894 481 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 MIR1291-201ENST00000627649 87 ntBASIC2.15□□□□□ -2.07
NPAS1Q99742 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NPAS1Q99742 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NPAS1Q99742 RNU4-90P-201ENST00000362773 141 ntBASIC2.14□□□□□ -2.07
NPAS1Q99742 SNORA20B-201ENST00000384220 132 ntBASIC2.14□□□□□ -2.07
NPAS1Q99742 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms