Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC012640.5-201ENST00000623897 319 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-1255P-201ENST00000363434 112 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-103P-201ENST00000363686 107 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 Y_RNA.337-201ENST00000365312 102 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 MIR15B-201ENST00000385045 98 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-1248P-201ENST00000391096 64 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AL512604.1-201ENST00000404812 257 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 HMGN2P10-201ENST00000448085 265 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 RPL26P9-201ENST00000457466 433 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU7-141P-201ENST00000459304 62 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 YWHAEP4-201ENST00000505390 198 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 CYCSP23-201ENST00000519781 313 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AL031274.2-201ENST00000599419 203 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AL137843.1-201ENST00000605078 385 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 AL078604.3-201ENST00000615580 211 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 SCARNA15.3-201ENST00000626315 122 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 SCARNA4.1-201ENST00000628597 123 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.98□□□□□ -1.93
CDK5RAP1Q96SZ6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 Y_RNA.43-201ENST00000362670 111 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-643P-201ENST00000384018 107 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-245P-201ENST00000384020 107 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 MIR512-1-201ENST00000384913 84 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-855P-201ENST00000410395 104 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-1064P-201ENST00000410626 104 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 AC027124.2-201ENST00000428249 105 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 AC087499.2-201ENST00000432861 149 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 AC105272.1-201ENST00000438604 198 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 CYCTP-201ENST00000504253 315 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 RAC1P5-201ENST00000512182 576 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-1282P-201ENST00000516735 96 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 RNA5SP170-201ENST00000517150 101 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 AC006199.1-201ENST00000548728 219 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 AC021739.1-201ENST00000559631 174 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 AC127455.1-201ENST00000565496 145 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 CYP4A27P-201ENST00000567218 190 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 Y_RNA.802-201ENST00000614892 130 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 AC002064.3-201ENST00000623448 346 ntBASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK5RAP1Q96SZ6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU1-62P-201ENST00000362599 164 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-529P-201ENST00000363383 104 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 Y_RNA.229-201ENST00000364347 113 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-1264P-201ENST00000383891 107 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 AL606845.1-201ENST00000404881 255 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 RNA5SP492-201ENST00000411330 114 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 AC012308.1-201ENST00000451232 178 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 AC006445.2-201ENST00000510061 472 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 MTND5P34-201ENST00000568888 325 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 MIR3613-201ENST00000579844 87 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 HMGN2P15-201ENST00000585707 270 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 AC090115.4-201ENST00000609970 188 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 TUG1_4.1-201ENST00000619464 181 ntBASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDK5RAP1Q96SZ6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-1082P-201ENST00000364574 107 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORA18.2-201ENST00000383865 132 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 SNORA22-201ENST00000383907 134 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 RNU6-476P-201ENST00000384726 107 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 MIR616-201ENST00000385293 97 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 BPY2DP-201ENST00000422208 265 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 AC004386.2-201ENST00000441858 148 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 AC025750.2-201ENST00000442609 450 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 AIG1P1-201ENST00000503376 148 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 AC091826.1-201ENST00000514065 313 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 AP000867.2-201ENST00000532468 320 ntBASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDK5RAP1Q96SZ6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms