Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC046134.1-201ENST00000514454 666 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 SNORD45.4-201ENST00000516629 73 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 MIR3136-201ENST00000583498 78 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 MIR6854-201ENST00000614935 69 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 AL356094.1-201ENST00000624663 1212 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 RNU4-61P-201ENST00000411243 107 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 AC015818.7-201ENST00000428754 109 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 AC087499.7-201ENST00000441958 109 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 USP9YP12-201ENST00000450481 570 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 SERF1AP1-201ENST00000514575 187 ntBASIC-1.99□□□□□ -2.73
VPS13AQ96RL7 MIR1273C-201ENST00000578669 77 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 RNU6-862P-201ENST00000362804 105 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 SNORD32B-201ENST00000364460 84 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 Y_RNA.250-201ENST00000364542 110 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 FAM204CP-201ENST00000424489 642 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 AC104073.1-201ENST00000451988 151 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 RNU6-965P-201ENST00000516721 96 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 MTND4P11-201ENST00000417020 1058 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 RPL37P6-201ENST00000460682 294 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 MIR4742-201ENST00000581069 85 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 MIR3192-201ENST00000584920 77 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 AC122133.1-201ENST00000613964 233 ntBASIC-2□□□□□ -2.73
VPS13AQ96RL7 Y_RNA.38-201ENST00000362617 102 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 RNU6-784P-201ENST00000384330 106 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 MIR660-201ENST00000385235 97 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 FCF1P10-201ENST00000407590 479 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 AL929325.1-201ENST00000603096 117 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 AC016542.1-201ENST00000608259 493 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 AL096861.1-201ENST00000610899 123 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 MIR7-1-201ENST00000384871 110 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 AC007000.2-201ENST00000442564 487 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 AC007684.1-201ENST00000609671 477 ntBASIC-2.01□□□□□ -2.73
VPS13AQ96RL7 Y_RNA.302-201ENST00000364997 102 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 RNU6-975P-201ENST00000384296 105 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 LRRC6P1-201ENST00000532188 885 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AP000676.1-201ENST00000533307 52 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AC018630.3-201ENST00000542637 96 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AC090617.3-201ENST00000573670 475 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 MIR4639-201ENST00000584938 69 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AC009269.6-201ENST00000621778 588 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 SNORA22B-201ENST00000383876 138 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 MIR516B1-201ENST00000385211 90 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AC234772.3-201ENST00000602277 528 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AL359547.2-201ENST00000615810 418 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 AC121247.2-201ENST00000604776 136 ntBASIC-2.02□□□□□ -2.73
VPS13AQ96RL7 MIRLET7F2-201ENST00000385277 83 ntBASIC-2.03□□□□□ -2.73
VPS13AQ96RL7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-2.03□□□□□ -2.73
VPS13AQ96RL7 AL161729.4-201ENST00000604650 476 ntBASIC-2.03□□□□□ -2.73
VPS13AQ96RL7 MIR1248-201ENST00000629190 106 ntBASIC-2.03□□□□□ -2.73
VPS13AQ96RL7 Y_RNA.168-201ENST00000363740 102 ntBASIC-2.03□□□□□ -2.73
VPS13AQ96RL7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-2.03□□□□□ -2.73
VPS13AQ96RL7 AC079598.5-201ENST00000547460 117 ntBASIC-2.03□□□□□ -2.73
VPS13AQ96RL7 RNU6-743P-201ENST00000364151 106 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 RNU6-726P-201ENST00000364680 107 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.287-201ENST00000364853 94 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 RNU6-900P-201ENST00000384498 102 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 MT-TC-201ENST00000387405 66 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 MIR300-201ENST00000401138 83 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 RPL36P19-201ENST00000430744 301 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 YWHAZP8-201ENST00000436935 731 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 RNU6-469P-201ENST00000516253 101 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 AC107952.2-201ENST00000606048 486 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 AP001330.5-201ENST00000607176 411 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 AC023510.2-201ENST00000622162 746 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 RNU6-396P-201ENST00000365369 105 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 RNU6-78P-201ENST00000362897 107 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 SNORD115-26-201ENST00000365067 82 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.323-201ENST00000365157 109 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 RNU6-754P-201ENST00000391166 107 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 MIR888-201ENST00000401186 77 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 RNU6-1332P-201ENST00000516666 104 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.695-201ENST00000516715 107 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 MIR4676-201ENST00000583078 72 ntBASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-2.04□□□□□ -2.74
VPS13AQ96RL7 SNORD41-201ENST00000386967 70 ntBASIC-2.05□□□□□ -2.74
VPS13AQ96RL7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-2.05□□□□□ -2.74
VPS13AQ96RL7 AC079610.2-201ENST00000604818 690 ntBASIC-2.05□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.05□□□□□ -2.74
VPS13AQ96RL7 SNORD110-201ENST00000408189 75 ntBASIC-2.05□□□□□ -2.74
VPS13AQ96RL7 RNU6-135P-201ENST00000516769 101 ntBASIC-2.05□□□□□ -2.74
VPS13AQ96RL7 AC091163.3-201ENST00000518269 1144 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms