Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 RPS23P5-201ENST00000495419 428 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 RNU6-344P-201ENST00000516635 111 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 CYCSP23-201ENST00000519781 313 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 AC026470.2-201ENST00000561492 181 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 MIR3199-1-201ENST00000582434 88 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 AC022441.3-201ENST00000605737 136 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 AC091932.3-201ENST00000624223 323 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CCDC17Q96LX7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC17Q96LX7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC17Q96LX7 AC080128.1-201ENST00000474389 1917 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 Y_RNA.277-201ENST00000364754 102 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 RNU6-290P-201ENST00000365212 101 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 RNU6-338P-201ENST00000383888 105 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC17Q96LX7 MIR320B2-201ENST00000408479 138 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 AC009237.7-201ENST00000447357 229 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 SERF1AP1-201ENST00000514575 187 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 RNU1-117P-201ENST00000517041 158 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 SCARNA3-201ENST00000517097 143 ntBASIC2.53□□□□□ -2
CCDC17Q96LX7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.53□□□□□ -2
CCDC17Q96LX7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC17Q96LX7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC17Q96LX7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.52□□□□□ -2.01
CCDC17Q96LX7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CCDC17Q96LX7 RNU6-454P-201ENST00000364292 107 ntBASIC2.52□□□□□ -2.01
CCDC17Q96LX7 SNORA67.3-201ENST00000384366 140 ntBASIC2.52□□□□□ -2.01
CCDC17Q96LX7 U6atac.2-201ENST00000408644 118 ntBASIC2.52□□□□□ -2.01
CCDC17Q96LX7 RNU6-847P-201ENST00000411115 108 ntBASIC2.52□□□□□ -2.01
CCDC17Q96LX7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC17Q96LX7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC17Q96LX7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC17Q96LX7 AL670379.2-201ENST00000604983 252 ntBASIC2.52□□□□□ -2.01
CCDC17Q96LX7 AC141273.2-201ENST00000618989 130 ntBASIC2.52□□□□□ -2.01
CCDC17Q96LX7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC17Q96LX7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.52□□□□□ -2.01
CCDC17Q96LX7 AP006437.1-201ENST00000641440 3685 ntBASIC2.52□□□□□ -2.01
CCDC17Q96LX7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.331-201ENST00000365267 102 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.352-201ENST00000365439 102 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.418-201ENST00000384029 102 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 RNU6-21P-201ENST00000384710 107 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.569-201ENST00000384749 103 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 MIR504-201ENST00000385065 83 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 AL023284.1-201ENST00000403956 276 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC17Q96LX7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC17Q96LX7 MIR3124-201ENST00000582636 67 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 SNORD11B-201ENST00000607707 90 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 AC068205.3-201ENST00000636385 468 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 MIR3674-201ENST00000636576 68 ntBASIC2.51□□□□□ -2.01
CCDC17Q96LX7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC17Q96LX7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC17Q96LX7 AC010329.5-201ENST00000623497 2174 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.54-201ENST00000362766 105 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.65-201ENST00000362846 100 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.383-201ENST00000383855 97 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.478-201ENST00000384358 107 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.552-201ENST00000384665 112 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 MIR29B2-201ENST00000385055 81 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 MIR548B-201ENST00000385247 97 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 SNORD58.1-201ENST00000391313 66 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 RNU6-651P-201ENST00000411040 105 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 MRPS10P1-201ENST00000448483 130 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 AL139109.1-201ENST00000455491 297 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 RNU6-107P-201ENST00000516643 102 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC17Q96LX7 AL109918.3-201ENST00000603072 338 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 AL590240.4-201ENST00000616908 390 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 AC006001.4-201ENST00000622243 395 ntBASIC2.5□□□□□ -2.01
CCDC17Q96LX7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC17Q96LX7 ZNF355P-201ENST00000427301 3216 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC17Q96LX7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC17Q96LX7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC17Q96LX7 MIR410-201ENST00000362222 80 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 RNU6-545P-201ENST00000362681 104 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 Y_RNA.269-201ENST00000364685 89 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 RNU6-326P-201ENST00000365480 107 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 MIR548H3-201ENST00000408771 118 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 RNA5SP475-201ENST00000410568 110 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 RPL23AP36-201ENST00000413895 458 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 AL445646.1-201ENST00000431784 216 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC17Q96LX7 RNU2-31P-201ENST00000516954 155 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 RNU6-586P-201ENST00000517265 104 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 RNU1-104P-201ENST00000517280 175 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC17Q96LX7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC17Q96LX7 RPL21P9-201ENST00000556149 474 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.49□□□□□ -2.01
CCDC17Q96LX7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC17Q96LX7 SNORA72.2-201ENST00000365028 127 ntBASIC2.48□□□□□ -2.01
CCDC17Q96LX7 RNU2-54P-201ENST00000410299 190 ntBASIC2.48□□□□□ -2.01
CCDC17Q96LX7 AL390729.2-201ENST00000416137 156 ntBASIC2.48□□□□□ -2.01
CCDC17Q96LX7 MTCO1P5-201ENST00000433573 344 ntBASIC2.48□□□□□ -2.01
CCDC17Q96LX7 ATP5EP1-201ENST00000510257 156 ntBASIC2.48□□□□□ -2.01
CCDC17Q96LX7 RNU2-12P-201ENST00000517216 168 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms