Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR6840-201ENST00000611937 71 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS50Q96JG6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.44□□□□□ -2.02
VPS50Q96JG6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS50Q96JG6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS50Q96JG6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS50Q96JG6 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 MIR410-201ENST00000362222 80 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 Y_RNA.237-201ENST00000364439 102 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 Y_RNA.307-201ENST00000365022 117 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 Y_RNA.331-201ENST00000365267 102 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 RNU6-301P-201ENST00000384277 107 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 Y_RNA.556-201ENST00000384677 113 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 AC016925.1-201ENST00000458303 298 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 RNU7-57P-201ENST00000459540 60 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 MTND1P19-201ENST00000511780 315 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 Y_RNA.680-201ENST00000516441 93 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS50Q96JG6 MIR4298-201ENST00000584380 73 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 AC062037.2-201ENST00000610137 73 ntBASIC2.43□□□□□ -2.02
VPS50Q96JG6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS50Q96JG6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS50Q96JG6 SNORA3A-201ENST00000364113 130 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 Y_RNA.288-201ENST00000364854 92 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 RNU6-438P-201ENST00000365561 103 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 RNU6-21P-201ENST00000384710 107 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 MIR300-201ENST00000401138 83 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 MIR1185-2-201ENST00000408687 86 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 AC096920.1-201ENST00000423991 241 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 RNU6-1132P-201ENST00000459214 107 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 SEPT14P8-201ENST00000508026 178 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 AC093259.1-201ENST00000509755 300 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 RNU6-1338P-201ENST00000516328 91 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 RNU6-155P-201ENST00000516347 100 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 RNA5SP148-201ENST00000516527 94 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 SCARNA24.2-201ENST00000516968 130 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.42□□□□□ -2.02
VPS50Q96JG6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS50Q96JG6 MIR4753-201ENST00000585119 83 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 AC012433.1-201ENST00000588916 398 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 AC008749.1-201ENST00000597650 306 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 AC006006.1-201ENST00000603082 144 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 SNORD113-5-201ENST00000607261 78 ntBASIC2.42□□□□□ -2.02
VPS50Q96JG6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS50Q96JG6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
VPS50Q96JG6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
VPS50Q96JG6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS50Q96JG6 MIR340-201ENST00000362125 95 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 Y_RNA.401-201ENST00000383965 117 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 RNU6-975P-201ENST00000384296 105 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 RNU2-54P-201ENST00000410299 190 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 AC009963.1-201ENST00000417265 157 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 AC010531.2-201ENST00000465012 153 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 SNORA4.4-201ENST00000515921 135 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 RNU2-12P-201ENST00000517216 168 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 AC010900.2-201ENST00000604508 210 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 AC022202.1-201ENST00000613515 211 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 AC006001.4-201ENST00000622243 395 ntBASIC2.41□□□□□ -2.02
VPS50Q96JG6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS50Q96JG6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS50Q96JG6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.4□□□□□ -2.02
VPS50Q96JG6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
VPS50Q96JG6 RNU4-90P-201ENST00000362773 141 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 RNU6-290P-201ENST00000365212 101 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 RNU6-1310P-201ENST00000384153 107 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 AL357139.1-201ENST00000407792 426 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 RNU6-57P-201ENST00000411348 103 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 AL135786.1-201ENST00000415892 214 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 TOMM22P2-201ENST00000430735 237 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 AC009238.1-201ENST00000442165 424 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS50Q96JG6 AC009237.6-201ENST00000446969 424 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 MRPS10P1-201ENST00000448483 130 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 NDUFB4P10-201ENST00000452541 359 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 PRELID3BP1-201ENST00000457142 540 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 AC110588.1-201ENST00000559699 137 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 MIR3145-201ENST00000580727 82 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 SDR42E1P4-201ENST00000620894 481 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 AC012640.5-201ENST00000623897 319 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 AC127459.3-201ENST00000624328 466 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 MTND5P6-201ENST00000422338 1798 ntBASIC2.4□□□□□ -2.03
VPS50Q96JG6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
VPS50Q96JG6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
VPS50Q96JG6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS50Q96JG6 AP006437.1-201ENST00000641440 3685 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 AL391987.6-201ENST00000305671 199 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 Y_RNA.14-201ENST00000362415 103 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 Y_RNA.418-201ENST00000384029 102 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 Y_RNA.477-201ENST00000384352 108 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 Y_RNA.518-201ENST00000384552 113 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 MIR1262-201ENST00000408276 93 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 RPL23AP36-201ENST00000413895 458 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 MTCO1P44-201ENST00000441935 243 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS50Q96JG6 AL137159.1-201ENST00000452808 512 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 AC005042.3-201ENST00000453230 174 ntBASIC2.39□□□□□ -2.03
VPS50Q96JG6 AC013412.1-201ENST00000610687 192 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms