Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RNU6-700P-201ENST00000391043 107 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 SUMO2P12-201ENST00000405924 140 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 RNU6-370P-201ENST00000411008 104 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 RNU6-1304P-201ENST00000411374 106 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 JTBP1-201ENST00000441314 247 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AC073910.1-201ENST00000445047 438 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 RNU6-221P-201ENST00000459541 99 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 RN7SL274P-201ENST00000492268 272 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AC091951.2-201ENST00000500762 203 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 RNU6-277P-201ENST00000516272 106 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 SCARNA16.2-201ENST00000516520 172 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AC025647.1-201ENST00000517879 253 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AL121579.1-201ENST00000555129 305 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 MIR548S-201ENST00000581352 82 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 AC113139.1-201ENST00000605049 239 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 PISRT1.1-201ENST00000616930 107 ntBASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.57□□□□□ -2.16
SNRNP40Q96DI7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 SNORA63D-201ENST00000364359 132 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 SNORA16.1-201ENST00000364597 132 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 RNY3P14-201ENST00000384309 102 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 RNU6-331P-201ENST00000384724 107 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 MIR548B-201ENST00000385247 97 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 snoU13.27-201ENST00000459278 104 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 AC091179.3-201ENST00000474761 144 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 RPL26P26-201ENST00000480251 434 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 FGF7P4-201ENST00000509595 295 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 RNU6-1114P-201ENST00000516022 107 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 RNU1-142P-201ENST00000516682 145 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 RNU6-307P-201ENST00000516743 106 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 RNU6-1213P-201ENST00000517075 94 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 APOOP3-201ENST00000536787 586 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 CBX3P4-201ENST00000538909 354 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 AC012493.3-201ENST00000604494 112 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 AL132765.2-201ENST00000610812 351 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 AC010999.1-201ENST00000611856 324 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 AC092794.2-201ENST00000620933 563 ntBASIC1.56□□□□□ -2.16
SNRNP40Q96DI7 WWP1P1-201ENST00000466609 2769 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 ICE2P2-201ENST00000483823 2787 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 RNU6-874P-201ENST00000362390 105 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 MIR190B-201ENST00000401119 79 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 MTCYBP10-201ENST00000424905 650 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 AL353997.1-201ENST00000432936 108 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 RPL23AP50-201ENST00000434149 455 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 NDUFB4P10-201ENST00000452541 359 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 RNU7-87P-201ENST00000459343 62 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 AC093303.1-201ENST00000514549 295 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 AC024995.1-201ENST00000523014 93 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 MIR4709-201ENST00000577272 72 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 AC025253.1-201ENST00000613623 543 ntBASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.106-201ENST00000363189 100 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 RNU4-42P-201ENST00000364738 142 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 RNU6-338P-201ENST00000383888 105 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 RNU6-310P-201ENST00000384655 107 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 RNA5SP467-201ENST00000391274 118 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 SNORA75.6-201ENST00000391318 127 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 MIR1185-2-201ENST00000408687 86 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.646-201ENST00000410980 101 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 MTND5P20-201ENST00000448677 143 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 RNU7-34P-201ENST00000459394 64 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 RNU6-875P-201ENST00000516488 106 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.683-201ENST00000516508 93 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 MIR4422-201ENST00000581938 83 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 AL359075.3-201ENST00000613288 217 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SNRNP40Q96DI7 RNU6-222P-201ENST00000362438 107 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.287-201ENST00000364853 94 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.364-201ENST00000365532 101 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 RNU6-950P-201ENST00000384651 107 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 EIF1P2-201ENST00000428233 350 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 MTND5P16-201ENST00000460269 1703 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 RPS26P45-201ENST00000471748 340 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 RPL17P19-201ENST00000489069 552 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 RNU6-559P-201ENST00000516151 98 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 Y_RNA.702-201ENST00000516843 96 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 AC093023.1-201ENST00000547375 507 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 AK6P2-201ENST00000549020 471 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 AL137100.2-201ENST00000555786 315 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 MTND5P35-201ENST00000557537 1720 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 AC090617.3-201ENST00000573670 475 ntBASIC1.53□□□□□ -2.16
SNRNP40Q96DI7 MZT1P2-201ENST00000604387 248 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms