| CLUAP1 | Q96AJ1 | Y_RNA.580-201 | ENST00000391004 | 95 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AL359195.1-201 | ENST00000416657 | 339 nt | TSL 3 BASIC | 3.98 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RN7SL75P-201 | ENST00000461926 | 281 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | FRS2-201 | ENST00000397997 | 6550 nt | APPRIS P1 TSL 5 BASIC | 3.98 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | VSTM2A-OT1-201 | ENST00000456049 | 3031 nt | TSL 1 (best) BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC093831.2-201 | ENST00000624393 | 3427 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U8.7-201 | ENST00000364940 | 136 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | DEFB119-202 | ENST00000376315 | 324 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | SNORA9-201 | ENST00000384215 | 133 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.506-201 | ENST00000384494 | 102 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR1253-201 | ENST00000408273 | 105 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RN7SKP220-201 | ENST00000410611 | 288 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC016909.1-201 | ENST00000415916 | 166 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AL445687.1-201 | ENST00000439946 | 251 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC025750.2-201 | ENST00000442609 | 450 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RPS27P22-201 | ENST00000478056 | 241 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | LINC02276-201 | ENST00000508388 | 138 nt | TSL 3 BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-991P-201 | ENST00000516168 | 107 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-667P-201 | ENST00000517186 | 102 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC127455.1-201 | ENST00000565496 | 145 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | hsa-mir-548d-2.1-201 | ENST00000582790 | 97 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR3133-201 | ENST00000583157 | 78 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AL161756.2-201 | ENST00000604597 | 246 nt | BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | NEB-201 | ENST00000172853 | 20634 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | TAB3-203 | ENST00000378930 | 6255 nt | APPRIS P1 TSL 1 (best) BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | DOPEY1-203 | ENST00000369739 | 7743 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | PHF3-202 | ENST00000393387 | 6947 nt | APPRIS P1 TSL 1 (best) BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | ZNF280D-201 | ENST00000267807 | 4328 nt | APPRIS P3 TSL 1 (best) BASIC | 3.97 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | BMP5-201 | ENST00000370830 | 3952 nt | APPRIS P1 TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | FILIP1L-206 | ENST00000471562 | 2854 nt | TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.170-201 | ENST00000363746 | 110 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.412-201 | ENST00000384001 | 104 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | MIR483-201 | ENST00000385070 | 76 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SNORA36B-201 | ENST00000410438 | 131 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AL135786.1-201 | ENST00000415892 | 214 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC018495.1-201 | ENST00000440266 | 452 nt | TSL 3 BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC098820.1-201 | ENST00000453157 | 512 nt | TSL 2 BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SNORA70.24-201 | ENST00000517233 | 118 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | MIR3186-201 | ENST00000577404 | 85 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | MIR5195-201 | ENST00000583555 | 115 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | POLR3GP1-201 | ENST00000594073 | 261 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC021753.1-201 | ENST00000635724 | 168 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | KTN1-207 | ENST00000438792 | 4449 nt | APPRIS ALT2 TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SLC9C1-205 | ENST00000487372 | 3979 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | DST-204 | ENST00000361203 | 22431 nt | APPRIS ALT2 TSL 5 BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC093908.1-201 | ENST00000623125 | 8092 nt | BASIC | 3.96 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | WWP1-201 | ENST00000265428 | 3362 nt | APPRIS P1 TSL 1 (best) BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | NEB-220 | ENST00000618972 | 26307 nt | APPRIS ALT2 TSL 5 BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.99-201 | ENST00000363138 | 105 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNU4-13P-201 | ENST00000364019 | 141 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.272-201 | ENST00000364696 | 102 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SNORA25B-201 | ENST00000365507 | 128 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNU6-125P-201 | ENST00000384505 | 107 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SNORA26.7-201 | ENST00000391288 | 122 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | TRIAP1P1-201 | ENST00000427062 | 225 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | UQCRHP3-201 | ENST00000451503 | 251 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RN7SL807P-201 | ENST00000470923 | 297 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC010409.1-201 | ENST00000487382 | 476 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC117454.1-201 | ENST00000491120 | 168 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | LINC02164-201 | ENST00000566684 | 272 nt | TSL 3 BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SNORA50A-202 | ENST00000629536 | 136 nt | BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | MGAT4C-207 | ENST00000552808 | 1937 nt | APPRIS P1 TSL 2 BASIC | 3.95 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | PKHD1L1-201 | ENST00000378402 | 13076 nt | APPRIS P1 TSL 1 (best) BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | KNTC1-205 | ENST00000450485 | 3655 nt | TSL 2 BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AL356292.1-201 | ENST00000283110 | 373 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | MT-ATP8-201 | ENST00000361851 | 207 nt | APPRIS P1 BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.172-201 | ENST00000363765 | 102 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNU6-117P-201 | ENST00000365415 | 107 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SNORA7.4-201 | ENST00000384249 | 137 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SNORD116-13-201 | ENST00000384408 | 92 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNU6-578P-201 | ENST00000390980 | 103 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AL162725.1-201 | ENST00000435405 | 301 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC009238.1-201 | ENST00000442165 | 424 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC009237.6-201 | ENST00000446969 | 424 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC018868.1-201 | ENST00000491307 | 315 nt | BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | VCAN-AS1-202 | ENST00000513899 | 453 nt | TSL 3 BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AP002992.1-202 | ENST00000530842 | 551 nt | TSL 2 BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AL355376.2-201 | ENST00000603866 | 267 nt | TSL 5 BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RASSF8-210 | ENST00000541490 | 5505 nt | APPRIS P1 TSL 5 BASIC | 3.94 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | SKIL-202 | ENST00000413427 | 2702 nt | TSL 1 (best) BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | ASPN-202 | ENST00000375544 | 2470 nt | APPRIS P1 TSL 1 (best) BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.24-201 | ENST00000362508 | 103 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNU6-674P-201 | ENST00000363831 | 107 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNA5SP125-201 | ENST00000364843 | 120 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNU6-969P-201 | ENST00000383900 | 105 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNY3P5-201 | ENST00000384127 | 102 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | MIR491-201 | ENST00000384877 | 84 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | MIR592-201 | ENST00000384959 | 97 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNU6-1228P-201 | ENST00000391014 | 107 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AL353689.1-201 | ENST00000438895 | 199 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RN7SL20P-201 | ENST00000488827 | 297 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RPS29P21-201 | ENST00000496272 | 170 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC097462.1-201 | ENST00000514125 | 324 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | RNU7-200P-201 | ENST00000516105 | 62 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC027419.1-201 | ENST00000522976 | 328 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | MIR4438-201 | ENST00000585271 | 93 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | AC093732.2-201 | ENST00000607950 | 274 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | U2.20-201 | ENST00000613956 | 192 nt | BASIC | 3.93 | □□□□□ -1.78 | | |
| CLUAP1 | Q96AJ1 | NEB-204 | ENST00000409198 | 20637 nt | APPRIS P3 TSL 5 BASIC | 3.93 | □□□□□ -1.78 | | |