Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FRG2DP-202ENST00000566967 323 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 AC104984.5-201ENST00000586878 94 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 AL021879.1-201ENST00000611756 288 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 AC090517.2-201ENST00000614966 680 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 SNORD3E-202ENST00000627253 216 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 AC018630.2-201ENST00000534866 2403 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
PTP4A1Q93096 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
PTP4A1Q93096 RNU1-17P-201ENST00000363022 152 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 RNU6-281P-201ENST00000384212 103 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 SNORD115-47-201ENST00000391226 86 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 MTCO3P19-201ENST00000415864 321 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.31□□□□□ -2.2
PTP4A1Q93096 AC010469.2-201ENST00000496412 480 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 RNU4-49P-201ENST00000516080 140 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 RNU7-128P-201ENST00000517247 62 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.31□□□□□ -2.2
PTP4A1Q93096 Y_RNA.106-201ENST00000363189 100 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 RNU6-60P-201ENST00000364792 103 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 Y_RNA.301-201ENST00000364990 103 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 Y_RNA.318-201ENST00000365131 97 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PTP4A1Q93096 RNU6-1264P-201ENST00000383891 107 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 Y_RNA.516-201ENST00000384541 124 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.3□□□□□ -2.2
PTP4A1Q93096 UQCRBP2-201ENST00000447827 297 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 AC108210.2-201ENST00000503681 201 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 AC091144.1-201ENST00000519573 138 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.3□□□□□ -2.2
PTP4A1Q93096 AC018638.8-201ENST00000588755 281 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 AL390123.1-201ENST00000603216 237 ntBASIC1.3□□□□□ -2.2
PTP4A1Q93096 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PTP4A1Q93096 MIR190B-201ENST00000401119 79 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 MTCYBP10-201ENST00000424905 650 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 RPS29P25-201ENST00000481709 171 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 Y_RNA.682-201ENST00000516457 100 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 RNU6-1016P-201ENST00000516689 94 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 CBX3P8-201ENST00000532412 525 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 AC023157.2-201ENST00000540596 141 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.29□□□□□ -2.2
PTP4A1Q93096 AL513534.2-201ENST00000603836 250 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 AC018462.2-201ENST00000605375 395 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.29□□□□□ -2.2
PTP4A1Q93096 MTND5P16-201ENST00000460269 1703 ntBASIC1.29□□□□□ -2.2
PTP4A1Q93096 Y_RNA.2-201ENST00000362330 96 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 Y_RNA.6-201ENST00000362350 114 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 U8.1-201ENST00000362843 134 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 RNU6-1059P-201ENST00000363752 98 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 RNU4-13P-201ENST00000364019 141 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 RNU4-76P-201ENST00000364509 141 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 Y_RNA.364-201ENST00000365532 101 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 RNU6-842P-201ENST00000384269 107 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 SNORD116-4-201ENST00000384733 96 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 MIR764-201ENST00000390811 85 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 MIR1277-201ENST00000408536 78 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 AC074085.1-201ENST00000413598 418 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 AL354695.1-201ENST00000427935 228 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 MTND5P5-201ENST00000503764 376 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 AC074133.1-201ENST00000515696 183 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 RNU6-307P-201ENST00000516743 106 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 RNU7-28P-201ENST00000516759 62 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 RNU7-172P-201ENST00000517125 64 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 AC027419.1-201ENST00000522976 328 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.28□□□□□ -2.2
PTP4A1Q93096 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.28□□□□□ -2.2
PTP4A1Q93096 MIR6715A-201ENST00000615929 79 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 AL353997.5-201ENST00000618886 171 ntBASIC1.28□□□□□ -2.2
PTP4A1Q93096 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
PTP4A1Q93096 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
PTP4A1Q93096 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.27□□□□□ -2.21
PTP4A1Q93096 RNU6-222P-201ENST00000362438 107 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 Y_RNA.265-201ENST00000364677 108 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 MIR660-201ENST00000385235 97 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 RNA5SP213-201ENST00000391031 106 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 SUMO1P2-201ENST00000452524 304 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 RNU7-87P-201ENST00000459343 62 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 RNU6-329P-201ENST00000459618 107 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 AC092989.1-201ENST00000481235 277 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 AC097462.1-201ENST00000514125 324 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 RNU2-56P-201ENST00000516826 190 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.27□□□□□ -2.21
PTP4A1Q93096 AC073413.2-201ENST00000604332 360 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 MIR6079-201ENST00000635807 62 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.27□□□□□ -2.21
PTP4A1Q93096 AC073544.1-201ENST00000600110 1595 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 Y_RNA.48-201ENST00000362710 103 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 RNU6-1148P-201ENST00000410992 104 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.26□□□□□ -2.21
PTP4A1Q93096 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 STAG3L5P-204ENST00000443759 179 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 AC107399.1-201ENST00000451226 265 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms