Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR5688-201ENST00000580619 83 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
BRF1Q92994 AC025754.2-201ENST00000606491 432 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 AL137790.1-201ENST00000634283 177 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 MIR7515-201ENST00000637837 67 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 AC132825.6-201ENST00000638861 357 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
BRF1Q92994 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRF1Q92994 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRF1Q92994 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.21□□□□□ -1.9
BRF1Q92994 Y_RNA.272-201ENST00000364696 102 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 Y_RNA.398-201ENST00000383952 99 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 RNU6-975P-201ENST00000384296 105 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 MIR626-201ENST00000385032 94 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 RNU2-2P-201ENST00000410396 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.2□□□□□ -1.9
BRF1Q92994 AC087499.2-201ENST00000432861 149 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 RPS27AP9-201ENST00000477681 438 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 MIR449C-201ENST00000516047 92 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
BRF1Q92994 MIR4753-201ENST00000585119 83 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 RNU2-4P-201ENST00000606190 192 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.15-201ENST00000611544 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.16-201ENST00000613119 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.12-201ENST00000613778 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.9-201ENST00000615427 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.11-201ENST00000616345 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.2-201ENST00000616535 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.3-201ENST00000617785 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.19-201ENST00000618602 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 RNU2-1-201ENST00000618664 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.6-201ENST00000619225 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.5-201ENST00000619465 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 U2.10-201ENST00000620268 191 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.2□□□□□ -1.9
BRF1Q92994 AC068700.1-201ENST00000565862 3754 ntBASIC3.2□□□□□ -1.9
BRF1Q92994 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
BRF1Q92994 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
BRF1Q92994 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
BRF1Q92994 RNU6-103P-201ENST00000363686 107 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 SNORD31B-201ENST00000364977 69 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 Y_RNA.412-201ENST00000384001 104 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 SNORA11.1-201ENST00000408133 129 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 RPS20P10-201ENST00000451209 253 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 RNU6-221P-201ENST00000459541 99 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 RN7SKP164-201ENST00000516138 266 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 AC021269.2-201ENST00000532318 330 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.19□□□□□ -1.9
BRF1Q92994 AC023043.3-201ENST00000593113 385 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 AC005000.2-201ENST00000605468 310 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 snoZ196.1-201ENST00000625269 89 ntBASIC3.19□□□□□ -1.9
BRF1Q92994 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.19□□□□□ -1.9
BRF1Q92994 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.19□□□□□ -1.9
BRF1Q92994 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRF1Q92994 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRF1Q92994 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BRF1Q92994 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BRF1Q92994 AC009487.2-201ENST00000420969 6821 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 AC134026.1-201ENST00000623249 2239 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 Y_RNA.8-201ENST00000362353 102 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 RNU6-704P-201ENST00000364162 103 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 SNORA8.3-201ENST00000384679 139 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 MIR526A2-201ENST00000390198 65 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
BRF1Q92994 MIR873-201ENST00000401120 77 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 MTCO2P33-201ENST00000402100 465 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 AL355796.1-201ENST00000406706 323 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 RPL23AP7-203ENST00000449021 469 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 HSPE1P13-201ENST00000451143 297 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.18□□□□□ -1.9
BRF1Q92994 ATP5EP1-201ENST00000510257 156 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 RNU6-346P-201ENST00000516288 111 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
BRF1Q92994 AC074050.1-201ENST00000563247 211 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 AC105245.1-201ENST00000581934 244 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 AC069294.1-201ENST00000608397 350 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
BRF1Q92994 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.18□□□□□ -1.9
BRF1Q92994 MTND1P7-201ENST00000632801 297 ntBASIC3.18□□□□□ -1.9
BRF1Q92994 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRF1Q92994 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.18□□□□□ -1.9
BRF1Q92994 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.18□□□□□ -1.9
BRF1Q92994 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.17□□□□□ -1.9
BRF1Q92994 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 Y_RNA.182-201ENST00000363880 111 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 RNU6-1048P-201ENST00000364054 107 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 RNU6-275P-201ENST00000364910 107 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 MIR95-201ENST00000385072 81 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.17□□□□□ -1.9
BRF1Q92994 AC016925.1-201ENST00000458303 298 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 RNU7-141P-201ENST00000459304 62 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 RPS29P12-201ENST00000460178 152 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 RNA5SP367-201ENST00000516557 118 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.17□□□□□ -1.9
BRF1Q92994 Y_RNA.802-201ENST00000614892 130 ntBASIC3.17□□□□□ -1.9
BRF1Q92994 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
BRF1Q92994 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms