Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-926P-201ENST00000384075 107 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-17P-201ENST00000384245 107 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-937P-201ENST00000384325 106 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-843P-201ENST00000384454 104 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-18P-201ENST00000384527 107 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-541P-201ENST00000384709 110 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 SNORD78.2-201ENST00000391076 69 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 MRPL35P1-201ENST00000404272 572 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 AC243964.1-201ENST00000441814 261 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 MTATP6P7-201ENST00000453315 681 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 MRPL42P6-201ENST00000486397 371 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RPL30P1-201ENST00000488676 339 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU5B-3P-201ENST00000516601 115 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 Y_RNA.700-201ENST00000516806 100 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 AP004607.1-201ENST00000524456 203 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.18□□□□□ -2.06
SNED1Q8TER0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.18□□□□□ -2.06
SNED1Q8TER0 MIR4658-201ENST00000584344 65 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 AL049779.4-201ENST00000604500 156 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 uc_338.14-201ENST00000613162 166 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-222P-201ENST00000362438 107 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RNU6-1266P-201ENST00000362794 105 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 Y_RNA.297-201ENST00000364950 91 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RNA5SP138-201ENST00000365098 114 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 Y_RNA.541-201ENST00000384640 113 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AL033519.2-201ENST00000403958 392 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 AL031659.1-201ENST00000447075 539 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AL138752.1-201ENST00000452964 351 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RNU4-71P-201ENST00000516258 113 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 RMST_6.1-201ENST00000611980 203 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC004792.1-201ENST00000614523 137 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC024581.2-201ENST00000619986 252 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNED1Q8TER0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNED1Q8TER0 SNORD56.1-201ENST00000362913 68 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RNU6-942P-201ENST00000363002 107 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RNU6-1286P-201ENST00000383871 107 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RNU6-142P-201ENST00000384019 107 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RNU1-52P-201ENST00000384190 164 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 SNORD116-20-201ENST00000384529 92 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 MIR518D-201ENST00000385014 87 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 Y_RNA.581-201ENST00000391017 97 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC080013.2-201ENST00000460866 323 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC073901.1-201ENST00000462471 408 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 SNRPGP7-201ENST00000469016 106 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 RPS23P5-201ENST00000495419 428 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 TRMT112P2-201ENST00000512910 132 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC021739.1-201ENST00000559631 174 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.17□□□□□ -2.06
SNED1Q8TER0 AC137590.2-201ENST00000619709 240 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 SCARNA4-201ENST00000629045 128 ntBASIC2.17□□□□□ -2.06
SNED1Q8TER0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNED1Q8TER0 RNU6-858P-201ENST00000362436 107 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 Y_RNA.150-201ENST00000363562 102 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 Y_RNA.200-201ENST00000364018 102 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 Y_RNA.270-201ENST00000364693 104 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 Y_RNA.274-201ENST00000364714 101 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 SNORA29-201ENST00000384183 140 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 Y_RNA.555-201ENST00000384673 110 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 MIR153-2-201ENST00000385225 87 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 RNU6-220P-201ENST00000390919 107 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 SNORD58.1-201ENST00000391313 66 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 EIF1P2-201ENST00000428233 350 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 AC087477.1-201ENST00000465747 340 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 RNA5SP480-201ENST00000516840 109 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 RNA5SP490-201ENST00000517141 136 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 MIR4643-201ENST00000577473 78 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 MIR3199-1-201ENST00000582434 88 ntBASIC2.16□□□□□ -2.06
SNED1Q8TER0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
SNED1Q8TER0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.15□□□□□ -2.06
SNED1Q8TER0 RNU4-90P-201ENST00000362773 141 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 RNY1-201ENST00000364228 113 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 MIR1298-201ENST00000408783 112 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 AC074117.2-201ENST00000417130 397 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 AL445305.1-201ENST00000432577 575 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 HMGN2P10-201ENST00000448085 265 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 AL441985.1-201ENST00000457727 251 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 AP000870.1-201ENST00000472927 406 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 AC091874.1-201ENST00000511402 339 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 SERF1AP1-201ENST00000514575 187 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 RNU6-496P-201ENST00000516145 99 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 CR383656.8-201ENST00000549046 145 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 AC005296.1-201ENST00000616145 209 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 FTX_2.1-201ENST00000618816 94 ntBASIC2.15□□□□□ -2.07
SNED1Q8TER0 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 Y_RNA.83-201ENST00000363005 113 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms