Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.77□□□□□ -1.97
SSH3Q8TE77 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.77□□□□□ -1.97
SSH3Q8TE77 PRELID3BP1-201ENST00000457142 540 ntBASIC2.77□□□□□ -1.97
SSH3Q8TE77 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.77□□□□□ -1.97
SSH3Q8TE77 AP002001.1-203ENST00000534002 267 ntBASIC2.77□□□□□ -1.97
SSH3Q8TE77 FTX_2.1-201ENST00000618816 94 ntBASIC2.77□□□□□ -1.97
SSH3Q8TE77 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.77□□□□□ -1.97
SSH3Q8TE77 AC091932.3-201ENST00000624223 323 ntBASIC2.77□□□□□ -1.97
SSH3Q8TE77 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.77□□□□□ -1.97
SSH3Q8TE77 MIR411-201ENST00000362239 96 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 Y_RNA.415-201ENST00000384012 112 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 Y_RNA.498-201ENST00000384460 102 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 AC007064.1-201ENST00000412238 351 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.76□□□□□ -1.97
SSH3Q8TE77 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.76□□□□□ -1.97
SSH3Q8TE77 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.76□□□□□ -1.97
SSH3Q8TE77 AL138752.1-201ENST00000452964 351 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 RNA5SP402-201ENST00000517148 110 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.76□□□□□ -1.97
SSH3Q8TE77 AC004792.1-201ENST00000614523 137 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 TCL6_2.1-201ENST00000615162 119 ntBASIC2.76□□□□□ -1.97
SSH3Q8TE77 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSH3Q8TE77 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
SSH3Q8TE77 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.75□□□□□ -1.97
SSH3Q8TE77 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.75□□□□□ -1.97
SSH3Q8TE77 snoU2_19.1-201ENST00000362361 80 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 Y_RNA.199-201ENST00000364014 102 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 RNU6-1062P-201ENST00000383908 107 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 RNU6-651P-201ENST00000411040 105 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 Z98742.3-201ENST00000418637 326 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 AC097463.2-201ENST00000421074 142 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 AC027124.2-201ENST00000428249 105 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 CKS1BP2-201ENST00000497342 240 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 AC008413.1-201ENST00000511864 177 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 RNA5SP200-201ENST00000516360 103 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 RNU6-344P-201ENST00000516635 111 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.75□□□□□ -1.97
SSH3Q8TE77 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.75□□□□□ -1.97
SSH3Q8TE77 AC091544.4-201ENST00000555268 342 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 RPL21P9-201ENST00000556149 474 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.75□□□□□ -1.97
SSH3Q8TE77 MIR4658-201ENST00000584344 65 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 SNORD11B-201ENST00000607707 90 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 AC004467.1-201ENST00000615678 330 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 AC064859.1-201ENST00000624741 174 ntBASIC2.75□□□□□ -1.97
SSH3Q8TE77 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSH3Q8TE77 Y_RNA.82-201ENST00000363000 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.92-201ENST00000363043 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.235-201ENST00000364412 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.306-201ENST00000365015 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.312-201ENST00000365089 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 RNA5SP126-201ENST00000365092 109 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.322-201ENST00000365151 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 SNORA18.2-201ENST00000383865 132 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 RNU2-63P-201ENST00000410792 194 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 RNU6-1199P-201ENST00000411249 104 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 EIF4EP4-201ENST00000424916 578 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 AL356320.1-201ENST00000429616 163 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 AC004386.2-201ENST00000441858 148 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.74□□□□□ -1.97
SSH3Q8TE77 AC009237.7-201ENST00000447357 229 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.650-201ENST00000459002 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.644-201ENST00000459006 113 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.74□□□□□ -1.97
SSH3Q8TE77 SNORD116-28-201ENST00000516123 91 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.674-201ENST00000516362 113 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.777-201ENST00000516982 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 CBX3P4-201ENST00000538909 354 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 MIR5194-201ENST00000582634 120 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 MIR4282-201ENST00000583613 67 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 MIR4298-201ENST00000584380 73 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.771-201ENST00000598668 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.789-201ENST00000622480 102 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 MIR3674-201ENST00000636576 68 ntBASIC2.74□□□□□ -1.97
SSH3Q8TE77 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSH3Q8TE77 Y_RNA.122-201ENST00000363331 96 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 RNU6-1264P-201ENST00000383891 107 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 RNU6-1310P-201ENST00000384153 107 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 SNORA12-201ENST00000391162 147 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 AL139095.1-201ENST00000404326 391 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 Y_RNA.590-201ENST00000410140 107 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 RNU2-54P-201ENST00000410299 190 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 RNA5SP504-201ENST00000410676 117 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 RNU2-61P-201ENST00000411069 191 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.73□□□□□ -1.97
SSH3Q8TE77 CR769767.1-201ENST00000436337 346 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 SUMO1P2-201ENST00000452524 304 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 COX6CP14-201ENST00000469580 174 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 RNU6-155P-201ENST00000516347 100 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 SNORA27.4-201ENST00000516650 95 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.73□□□□□ -1.97
SSH3Q8TE77 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.73□□□□□ -1.97
SSH3Q8TE77 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.73□□□□□ -1.97
SSH3Q8TE77 AC011921.3-201ENST00000605540 361 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 AL365434.2-201ENST00000607979 234 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 ZNF658B-202ENST00000615961 3375 ntBASIC2.73□□□□□ -1.97
SSH3Q8TE77 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.72□□□□□ -1.97
SSH3Q8TE77 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms