Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL357139.1-201ENST00000407792 426 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 RNU2-14P-201ENST00000411053 191 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 AC074290.1-201ENST00000448883 135 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 RNU6-221P-201ENST00000459541 99 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 AC091959.1-201ENST00000495857 238 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 AC093259.1-201ENST00000509755 300 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 RN7SKP132-201ENST00000516001 208 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 SNORA27.4-201ENST00000516650 95 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 AC079600.2-201ENST00000550076 130 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 PRELID2P1-201ENST00000552837 301 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 MIR3684-201ENST00000579779 74 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 AL033523.1-201ENST00000605153 153 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 AL449363.1-201ENST00000617815 186 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 snoZ196.1-201ENST00000625269 89 ntBASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 RNU6-859P-201ENST00000362728 107 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.54-201ENST00000362766 105 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.275-201ENST00000364726 110 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.332-201ENST00000365271 113 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 RNU6-514P-201ENST00000384208 107 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 AC063976.3-201ENST00000426849 329 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 AL139109.1-201ENST00000455491 297 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 SNORD109B-201ENST00000458961 67 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 SNORD109A-201ENST00000459128 67 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 AC096725.1-201ENST00000514266 313 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 RNU4-71P-201ENST00000516258 113 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 RNU6-191P-201ENST00000516295 94 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 RNA5SP490-201ENST00000517141 136 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 RPL21P9-201ENST00000556149 474 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 DEFB117-201ENST00000602356 141 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 AC009779.6-201ENST00000603972 165 ntBASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.68□□□□□ -1.98
CCHCR1Q8TD31 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 RNU4-80P-201ENST00000363200 141 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 RNU6-740P-201ENST00000364734 105 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.329-201ENST00000365209 107 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 RNU6-438P-201ENST00000365561 103 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.515-201ENST00000384535 112 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 AL031003.1-201ENST00000404229 172 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 AP001486.1-201ENST00000463339 476 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 RNA5SP356-201ENST00000515972 94 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 RNA5SP282-201ENST00000516355 108 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 RNU6-948P-201ENST00000516374 107 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 MIR3145-201ENST00000580727 82 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 MIR4282-201ENST00000583613 67 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 U4atac.1-201ENST00000618345 95 ntBASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCHCR1Q8TD31 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.82-201ENST00000363000 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.92-201ENST00000363043 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.235-201ENST00000364412 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.269-201ENST00000364685 89 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.306-201ENST00000365015 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.312-201ENST00000365089 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.322-201ENST00000365151 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RNU6-1235P-201ENST00000384559 107 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RNU6-1072P-201ENST00000384703 107 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RNU6-443P-201ENST00000384780 107 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 MIR23A-201ENST00000385245 73 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RNU6-1248P-201ENST00000391096 64 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RNA5SP184-201ENST00000411071 108 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 MTCO1P44-201ENST00000441935 243 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 SUMO1P2-201ENST00000452524 304 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 AL137159.1-201ENST00000452808 512 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.650-201ENST00000459002 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RNU6-498P-201ENST00000459468 107 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RNU2-34P-201ENST00000516534 121 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.777-201ENST00000516982 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.771-201ENST00000598668 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 AL162424.1-201ENST00000602325 221 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.789-201ENST00000622480 102 ntBASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.66□□□□□ -1.98
CCHCR1Q8TD31 SNORD114-7-201ENST00000362520 77 ntBASIC2.65□□□□□ -1.99
CCHCR1Q8TD31 Y_RNA.65-201ENST00000362846 100 ntBASIC2.65□□□□□ -1.99
CCHCR1Q8TD31 Y_RNA.76-201ENST00000362931 109 ntBASIC2.65□□□□□ -1.99
CCHCR1Q8TD31 RNU6-324P-201ENST00000363957 106 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms