Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RNU4-66P-201ENST00000365199 138 ntBASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 MIR153-2-201ENST00000385225 87 ntBASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 FABP5P4-201ENST00000437203 171 ntBASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 AC079354.2-201ENST00000453523 154 ntBASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 AC092807.2-201ENST00000609367 243 ntBASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 AC073534.2-201ENST00000620377 381 ntBASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 AC121333.1-201ENST00000567488 2709 ntBASIC0.67□□□□□ -2.3
CCDC148Q8NFR7 Y_RNA.319-201ENST00000365138 92 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 CALM2P3-201ENST00000400429 449 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 CALM2P4-201ENST00000430810 426 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 AL445305.1-201ENST00000432577 575 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 AL353572.1-201ENST00000442490 417 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 TPT1P7-201ENST00000458300 517 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 AC010620.1-201ENST00000601088 1102 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 AC073648.5-201ENST00000603502 305 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 AL078603.1-201ENST00000603824 313 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 MIR6079-201ENST00000635807 62 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 MTND4P12-201ENST00000498999 1377 ntBASIC0.66□□□□□ -2.3
CCDC148Q8NFR7 RNU6-280P-201ENST00000364145 104 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 Y_RNA.265-201ENST00000364677 108 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 SNORD116-13-201ENST00000384408 92 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 MIR32-201ENST00000384965 70 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 U8.16-201ENST00000391279 133 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 MTCO3P19-201ENST00000415864 321 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 USP9YP29-201ENST00000445112 563 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 LINC01399-202ENST00000458450 244 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 SNORD65B-201ENST00000459126 73 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 RNU6-261P-201ENST00000459506 102 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 OR9P1P-201ENST00000496431 281 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 AP002001.1-203ENST00000534002 267 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 AC026371.1-201ENST00000551867 419 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 AP001330.5-201ENST00000607176 411 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 AC004832.4-201ENST00000608952 331 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 FAM157A-202ENST00000615155 405 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 AC006504.8-201ENST00000621046 635 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 Z69908.1-201ENST00000622603 247 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 AL442644.1-201ENST00000454390 3105 ntBASIC0.65□□□□□ -2.31
CCDC148Q8NFR7 Y_RNA.100-201ENST00000363141 102 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 Y_RNA.167-201ENST00000363735 109 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 SNORD113-7-201ENST00000363762 77 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 Y_RNA.415-201ENST00000384012 112 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 RNU6-793P-201ENST00000384233 104 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 AL590002.1-201ENST00000406554 418 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 RPEP5-201ENST00000441137 268 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 AC245047.8-201ENST00000456455 284 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 RPS3AP17-201ENST00000472594 777 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 AC083798.1-201ENST00000472671 131 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 AC010598.1-201ENST00000510378 103 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 RNU6-1332P-201ENST00000516666 104 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 AC027288.2-201ENST00000553028 243 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 PIGPP4-201ENST00000584447 307 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
CCDC148Q8NFR7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 Y_RNA.116-201ENST00000363292 103 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 RNU6-873P-201ENST00000363833 107 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 Y_RNA.296-201ENST00000364930 108 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 RNU4-20P-201ENST00000365601 151 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 RNU6-128P-201ENST00000383976 107 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 MTND4P18-201ENST00000447010 465 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 RPS27P22-201ENST00000478056 241 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 RNA5SP220-201ENST00000516298 104 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 AC012557.2-201ENST00000605919 418 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 AL158209.2-201ENST00000619266 216 ntBASIC0.63□□□□□ -2.31
CCDC148Q8NFR7 RNU4-12P-201ENST00000365233 139 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 Y_RNA.381-201ENST00000365666 102 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 SNORA75.2-201ENST00000391138 150 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 SNORA75.3-201ENST00000391231 150 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 AL049830.1-201ENST00000468034 425 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 AC091179.3-201ENST00000474761 144 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 RNU2-56P-201ENST00000516826 190 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 AC104383.1-201ENST00000530297 370 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 RPL21P9-201ENST00000556149 474 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 AL391903.3-201ENST00000612158 163 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
CCDC148Q8NFR7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 MIR514A2-201ENST00000385131 88 ntBASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 MIR514A3-201ENST00000385132 88 ntBASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 RNU6-159P-201ENST00000391080 106 ntBASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 RNA5SP482-201ENST00000391269 118 ntBASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 Z82188.1-201ENST00000436709 154 ntBASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 AC010469.2-201ENST00000496412 480 ntBASIC0.61□□□□□ -2.31
CCDC148Q8NFR7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms