Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.58□□□□□ -2
KRT78Q8N1N4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.58□□□□□ -2
KRT78Q8N1N4 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
KRT78Q8N1N4 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
KRT78Q8N1N4 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
KRT78Q8N1N4 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
KRT78Q8N1N4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.58□□□□□ -2
KRT78Q8N1N4 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
KRT78Q8N1N4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.57□□□□□ -2
KRT78Q8N1N4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
KRT78Q8N1N4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.57□□□□□ -2
KRT78Q8N1N4 Y_RNA.170-201ENST00000363746 110 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 SNORD113-1-201ENST00000365321 69 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RNU6-47P-201ENST00000383866 107 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RNU6-318P-201ENST00000384283 103 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 Y_RNA.498-201ENST00000384460 102 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 SNORA40.19-201ENST00000390846 128 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 MIR1262-201ENST00000408276 93 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RN7SKP51-201ENST00000410781 304 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RN7SKP284-201ENST00000411002 343 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 COTL1P1-201ENST00000422309 375 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.57□□□□□ -2
KRT78Q8N1N4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.57□□□□□ -2
KRT78Q8N1N4 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RN7SL297P-201ENST00000483161 293 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RNU6-1278P-201ENST00000516130 107 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RNU6-948P-201ENST00000516374 107 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 RNU6-1012P-201ENST00000516606 109 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.57□□□□□ -2
KRT78Q8N1N4 MIR4659A-201ENST00000580269 81 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 AC008873.1-201ENST00000625051 138 ntBASIC2.57□□□□□ -2
KRT78Q8N1N4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.57□□□□□ -2
KRT78Q8N1N4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.57□□□□□ -2
KRT78Q8N1N4 U3.8-201ENST00000363675 217 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 Y_RNA.626-201ENST00000411288 95 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.56□□□□□ -2
KRT78Q8N1N4 AL109933.2-201ENST00000452651 260 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 HSPE1P25-201ENST00000455484 251 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 RNU7-57P-201ENST00000459540 60 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 AC074133.1-201ENST00000515696 183 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 SNORA40.9-201ENST00000515895 93 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 MIR548AI-201ENST00000579940 88 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 AC013412.1-201ENST00000610687 192 ntBASIC2.56□□□□□ -2
KRT78Q8N1N4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRT78Q8N1N4 Y_RNA.122-201ENST00000363331 96 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
KRT78Q8N1N4 RNU6-418P-201ENST00000384035 107 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.55□□□□□ -2
KRT78Q8N1N4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRT78Q8N1N4 RNU6-651P-201ENST00000411040 105 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 RNU6-625P-201ENST00000459412 107 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 SNORD116-28-201ENST00000516123 91 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 RNU2-34P-201ENST00000516534 121 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 AC233702.2-202ENST00000562547 291 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 AC004832.4-201ENST00000608952 331 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.55□□□□□ -2
KRT78Q8N1N4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.55□□□□□ -2
KRT78Q8N1N4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
KRT78Q8N1N4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRT78Q8N1N4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRT78Q8N1N4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRT78Q8N1N4 Y_RNA.44-201ENST00000362676 108 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 RNU6-740P-201ENST00000364734 105 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 RNU6-290P-201ENST00000365212 101 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 RNY4P28-201ENST00000365281 93 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 Z92545.1-201ENST00000411782 234 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 AP001486.1-201ENST00000463339 476 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 SEPT14P8-201ENST00000508026 178 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.54□□□□□ -2
KRT78Q8N1N4 AC096725.1-201ENST00000514266 313 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.54□□□□□ -2
KRT78Q8N1N4 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 AC018448.1-201ENST00000552843 316 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 LARP7P3-201ENST00000579888 337 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 MIR7106-201ENST00000612419 65 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
KRT78Q8N1N4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRT78Q8N1N4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.54□□□□□ -2
KRT78Q8N1N4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRT78Q8N1N4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRT78Q8N1N4 Y_RNA.8-201ENST00000362353 102 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 RNU6-859P-201ENST00000362728 107 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 RNU4-90P-201ENST00000362773 141 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 RNU6-23P-201ENST00000363283 107 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 Y_RNA.286-201ENST00000364813 102 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 Y_RNA.292-201ENST00000364904 97 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 RNU6-975P-201ENST00000384296 105 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 RNU4-30P-201ENST00000410245 143 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 RNU6-57P-201ENST00000411348 103 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 AC016717.1-201ENST00000448918 286 ntBASIC2.53□□□□□ -2
KRT78Q8N1N4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.53□□□□□ -2
KRT78Q8N1N4 MTND5P41-201ENST00000517498 206 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms