Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC100821.1-201ENST00000523153 2479 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 SNORD81.2-201ENST00000365153 76 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 Y_RNA.364-201ENST00000365532 101 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 RNU6-281P-201ENST00000384212 103 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 RNU6-370P-201ENST00000411008 104 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 AC073910.1-201ENST00000445047 438 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 MTND4P18-201ENST00000447010 465 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 snoU13.27-201ENST00000459278 104 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 RPL26P26-201ENST00000480251 434 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.27□□□□□ -2.21
SKA3Q8IX90 RNU6-107P-201ENST00000516643 102 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 AC091144.1-201ENST00000519573 138 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 AL121579.1-201ENST00000555129 305 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 AC090617.3-201ENST00000573670 475 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 AC005899.2-201ENST00000584353 90 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.27□□□□□ -2.21
SKA3Q8IX90 AC022306.2-201ENST00000617563 647 ntBASIC1.27□□□□□ -2.21
SKA3Q8IX90 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SKA3Q8IX90 RNA5SP361-201ENST00000362686 118 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 SNORA4.2-201ENST00000365313 147 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.26□□□□□ -2.21
SKA3Q8IX90 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SKA3Q8IX90 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.26□□□□□ -2.21
SKA3Q8IX90 EIF1P2-201ENST00000428233 350 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 TOMM22P2-201ENST00000430735 237 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AC098614.3-201ENST00000438957 440 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 JTBP1-201ENST00000441314 247 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 UQCRBP2-201ENST00000447827 297 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.26□□□□□ -2.21
SKA3Q8IX90 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AC024995.1-201ENST00000523014 93 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.26□□□□□ -2.21
SKA3Q8IX90 FRG2DP-202ENST00000566967 323 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.26□□□□□ -2.21
SKA3Q8IX90 AC022432.1-201ENST00000595739 310 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AP001485.1-201ENST00000604799 199 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AC016727.1-205ENST00000605437 569 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AC092794.2-201ENST00000620933 563 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 AL359757.2-201ENST00000624309 274 ntBASIC1.26□□□□□ -2.21
SKA3Q8IX90 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SKA3Q8IX90 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SKA3Q8IX90 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 RNU6-879P-201ENST00000364328 108 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 RNU6-360P-201ENST00000390944 104 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 RNU4-62P-201ENST00000410125 130 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.25□□□□□ -2.21
SKA3Q8IX90 snoU13.9-201ENST00000458927 103 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 U8.22-201ENST00000459141 133 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 RNU7-34P-201ENST00000459394 64 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 AL163195.1-201ENST00000496941 348 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 PRDX4P1-201ENST00000507189 574 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 SNORA20.3-201ENST00000516880 132 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 APOOP3-201ENST00000536787 586 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.25□□□□□ -2.21
SKA3Q8IX90 MIR1244-1-201ENST00000612829 85 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 AL359075.3-201ENST00000613288 217 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 AL357075.2-201ENST00000614906 189 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 MIR8063-201ENST00000621930 81 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 MIR1244-3-201ENST00000635744 85 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 MIR1244-2-201ENST00000636449 85 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 MIR1244-4-202ENST00000636813 85 ntBASIC1.25□□□□□ -2.21
SKA3Q8IX90 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SKA3Q8IX90 RNU6-1283P-201ENST00000365314 105 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 Y_RNA.557-201ENST00000384680 107 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 RNA5SP109-201ENST00000391010 116 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 Y_RNA.595-201ENST00000410403 105 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 RNU6-1186P-201ENST00000410429 97 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 COX6CP10-201ENST00000416832 224 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 FTH1P12-201ENST00000432137 551 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 AC005002.2-201ENST00000438228 269 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 AL606517.2-201ENST00000442855 241 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 RPL17P19-201ENST00000489069 552 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.24□□□□□ -2.21
SKA3Q8IX90 AC022868.1-201ENST00000517767 391 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.24□□□□□ -2.21
SKA3Q8IX90 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.24□□□□□ -2.21
SKA3Q8IX90 AL137100.2-201ENST00000555786 315 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 MIR4709-201ENST00000577272 72 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 SNORA77B-201ENST00000578179 125 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.24□□□□□ -2.21
SKA3Q8IX90 AC099654.14-201ENST00000638599 341 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 ICE2P2-201ENST00000483823 2787 ntBASIC1.24□□□□□ -2.21
SKA3Q8IX90 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
SKA3Q8IX90 RNU6-1188P-201ENST00000363795 107 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 RNU6-99P-201ENST00000364721 107 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 Y_RNA.358-201ENST00000365491 99 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 RNU6-1264P-201ENST00000383891 107 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 Y_RNA.390-201ENST00000383932 102 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 MIR329-1-201ENST00000385028 80 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 RNU6-482P-201ENST00000391068 107 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 RNU6-1304P-201ENST00000411374 106 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 RPL30P13-201ENST00000418873 348 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 AC108667.1-201ENST00000428618 249 ntBASIC1.23□□□□□ -2.21
SKA3Q8IX90 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.23□□□□□ -2.21
SKA3Q8IX90 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.23□□□□□ -2.21
SKA3Q8IX90 RPS26P45-201ENST00000471748 340 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 302.1 ms