| PRAG1 | Q86YV5 | MIR6515-201 | ENST00000619843 | 57 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | BCL2L11-225 | ENST00000640419 | 249 nt | APPRIS ALT2 TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | MYSM1-208 | ENST00000622766 | 6020 nt | TSL 1 (best) BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-1115P-201 | ENST00000362490 | 106 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU5F-3P-201 | ENST00000363767 | 117 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU1-139P-201 | ENST00000391307 | 165 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | MTCO2P12-201 | ENST00000427426 | 682 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | USP9YP16-201 | ENST00000430287 | 407 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | USP9YP23-201 | ENST00000455085 | 407 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RPS29P29-201 | ENST00000456396 | 171 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC008243.1-201 | ENST00000504955 | 389 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC091144.1-201 | ENST00000519573 | 138 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AP005660.1-201 | ENST00000522972 | 293 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC092447.9-201 | ENST00000603395 | 144 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | TEX15-203 | ENST00000638951 | 11341 nt | APPRIS P1 TSL 5 BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | PRKACB-204 | ENST00000370685 | 4481 nt | APPRIS P4 TSL 1 (best) BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU1-62P-201 | ENST00000362599 | 164 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | Y_RNA.394-201 | ENST00000383942 | 103 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-342P-201 | ENST00000384521 | 104 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AL139109.1-201 | ENST00000455491 | 297 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | U8.22-201 | ENST00000459141 | 133 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | Y_RNA.631-201 | ENST00000459607 | 101 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | HMGN1P7-201 | ENST00000491722 | 313 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | HMGB3P3-201 | ENST00000510526 | 400 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-1114P-201 | ENST00000516022 | 107 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC034114.1-201 | ENST00000520293 | 285 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RRN3P3-201 | ENST00000549207 | 578 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC136443.5-201 | ENST00000603741 | 370 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AL355512.1-202 | ENST00000607952 | 209 nt | TSL 5 BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC006157.1-201 | ENST00000611750 | 366 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | Y_RNA.31-201 | ENST00000362574 | 102 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU1-76P-201 | ENST00000362903 | 159 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | Y_RNA.138-201 | ENST00000363462 | 102 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-873P-201 | ENST00000363833 | 107 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | Y_RNA.179-201 | ENST00000363844 | 90 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-438P-201 | ENST00000365561 | 103 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | Y_RNA.496-201 | ENST00000384444 | 101 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | Y_RNA.592-201 | ENST00000410274 | 109 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AL354695.1-201 | ENST00000427935 | 228 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AL445305.1-201 | ENST00000432577 | 575 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC012312.1-201 | ENST00000503710 | 527 nt | TSL 2 BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC093259.1-201 | ENST00000509755 | 300 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC025871.1-202 | ENST00000518819 | 432 nt | TSL 3 BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | DEFB131C-201 | ENST00000528817 | 165 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AP003128.1-201 | ENST00000531414 | 448 nt | TSL 2 BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC022469.2-201 | ENST00000554759 | 396 nt | TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC007598.1-202 | ENST00000561528 | 435 nt | TSL 3 BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC138305.3-201 | ENST00000624988 | 240 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-222P-201 | ENST00000362438 | 107 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-545P-201 | ENST00000362681 | 104 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNY3P11-201 | ENST00000364153 | 102 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | SNORD31B-201 | ENST00000364977 | 69 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU1-115P-201 | ENST00000365329 | 160 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-1227P-201 | ENST00000383981 | 107 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | Y_RNA.445-201 | ENST00000384168 | 102 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-1145P-201 | ENST00000384246 | 107 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AL357139.1-201 | ENST00000407792 | 426 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC096644.2-201 | ENST00000429278 | 159 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | PRELID3BP1-201 | ENST00000457142 | 540 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC092991.1-201 | ENST00000477176 | 376 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | SRP72-202 | ENST00000504757 | 745 nt | TSL 2 BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | SNORA4.4-201 | ENST00000515921 | 135 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | RNU6-344P-201 | ENST00000516635 | 111 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AL442663.2-201 | ENST00000554385 | 511 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC009127.3-201 | ENST00000570531 | 403 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | MIR5695-201 | ENST00000579717 | 85 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | SNRPGP17-201 | ENST00000603780 | 214 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | AC010999.1-201 | ENST00000611856 | 324 nt | BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | ZBED5-202 | ENST00000432999 | 2741 nt | APPRIS P1 TSL 1 (best) BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | EYS-205 | ENST00000393380 | 5450 nt | TSL 1 (best) BASIC | 2.09 | □□□□□ -2.07 | | |
| PRAG1 | Q86YV5 | ZNF209P-201 | ENST00000593450 | 2304 nt | BASIC | 2.09 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | Y_RNA.28-201 | ENST00000362554 | 111 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | Y_RNA.80-201 | ENST00000362996 | 102 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | Y_RNA.485-201 | ENST00000384395 | 102 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | MIR329-1-201 | ENST00000385028 | 80 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | MIR300-201 | ENST00000401138 | 83 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | AL033519.2-201 | ENST00000403958 | 392 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | MIR1302-11-201 | ENST00000408051 | 138 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | MIR1302-9-201 | ENST00000408365 | 138 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | MIR1302-10-201 | ENST00000408734 | 138 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | PMCHL1-202 | ENST00000423102 | 261 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | AC009237.7-201 | ENST00000447357 | 229 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | SNORA25.10-201 | ENST00000515926 | 124 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | RNU6-911P-201 | ENST00000516523 | 104 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | AC022868.1-201 | ENST00000517767 | 391 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | ACTG1P17-203 | ENST00000561222 | 537 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | MZT1P2-201 | ENST00000604387 | 248 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | AL360085.1-201 | ENST00000604713 | 532 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | MIR1302-2-201 | ENST00000607096 | 138 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | SCOC-AS1-203 | ENST00000609616 | 405 nt | TSL 3 BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | ZEB2_AS1_1.1-201 | ENST00000621504 | 128 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | Y_RNA.132-201 | ENST00000363421 | 102 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | RNU6-879P-201 | ENST00000364328 | 108 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | RNA5SP363-201 | ENST00000365072 | 115 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | AC004866.1-201 | ENST00000411748 | 78 nt | BASIC | 2.08 | □□□□□ -2.08 | | |
| PRAG1 | Q86YV5 | SRIP3-201 | ENST00000413200 | 219 nt | BASIC | 2.08 | □□□□□ -2.08 | | |