Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 RNU6-221P-201ENST00000459541 99 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 AC093259.1-201ENST00000509755 300 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DDX53Q86TM3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 RNU6-237P-201ENST00000515985 71 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 AC009779.6-201ENST00000603972 165 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 AC090115.4-201ENST00000609970 188 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 MIR6817-201ENST00000615588 66 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DDX53Q86TM3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX53Q86TM3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
DDX53Q86TM3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.91□□□□□ -1.94
DDX53Q86TM3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.91□□□□□ -1.94
DDX53Q86TM3 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
DDX53Q86TM3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX53Q86TM3 AC024067.1-201ENST00000426199 223 ntBASIC2.91□□□□□ -1.94
DDX53Q86TM3 AC010531.2-201ENST00000465012 153 ntBASIC2.91□□□□□ -1.94
DDX53Q86TM3 AC091544.4-201ENST00000555268 342 ntBASIC2.91□□□□□ -1.94
DDX53Q86TM3 ZNF861P-201ENST00000588126 639 ntBASIC2.91□□□□□ -1.94
DDX53Q86TM3 AC005828.6-201ENST00000606610 232 ntBASIC2.91□□□□□ -1.94
DDX53Q86TM3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
DDX53Q86TM3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX53Q86TM3 MIR26A1-201ENST00000362205 77 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 RNY1-201ENST00000364228 113 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 RNU2-61P-201ENST00000411069 191 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 AC123900.1-201ENST00000420390 96 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 AC009238.1-201ENST00000442165 424 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 AC009237.6-201ENST00000446969 424 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 RNU6-498P-201ENST00000459468 107 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 YWHAEP4-201ENST00000505390 198 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 Y_RNA.679-201ENST00000516416 91 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX53Q86TM3 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 AC130289.1-201ENST00000577321 73 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 AL449363.1-201ENST00000617815 186 ntBASIC2.9□□□□□ -1.95
DDX53Q86TM3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX53Q86TM3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
DDX53Q86TM3 Y_RNA.122-201ENST00000363331 96 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
DDX53Q86TM3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 AL355796.1-201ENST00000406706 323 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 MTCO1P44-201ENST00000441935 243 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX53Q86TM3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 RNU6-138P-201ENST00000515952 107 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 SNORD116-28-201ENST00000516123 91 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 RNA5SP148-201ENST00000516527 94 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 AC027419.1-201ENST00000522976 328 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX53Q86TM3 MIR3684-201ENST00000579779 74 ntBASIC2.89□□□□□ -1.95
DDX53Q86TM3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX53Q86TM3 SNORD56.5-201ENST00000364281 72 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 RNU6-200P-201ENST00000364743 107 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 SNORA20B-201ENST00000384220 132 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 SNORA67.4-201ENST00000384688 142 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.88□□□□□ -1.95
DDX53Q86TM3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.88□□□□□ -1.95
DDX53Q86TM3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 RNU2-34P-201ENST00000516534 121 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 AC025647.1-201ENST00000517879 253 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.88□□□□□ -1.95
DDX53Q86TM3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 U4atac.1-201ENST00000618345 95 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 AL590808.1-201ENST00000618696 141 ntBASIC2.88□□□□□ -1.95
DDX53Q86TM3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 MT-TR-201ENST00000387439 65 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 MIR1298-201ENST00000408783 112 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 AL139156.1-201ENST00000412785 841 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.87□□□□□ -1.95
DDX53Q86TM3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.87□□□□□ -1.95
DDX53Q86TM3 Z98949.2-201ENST00000440996 144 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 SUMO1P2-201ENST00000452524 304 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 RNU7-26P-201ENST00000458980 63 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.650-201ENST00000459002 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 SNORD65B-201ENST00000459126 73 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 AC003982.1-202ENST00000469928 248 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 TRBV12-1-201ENST00000479785 344 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 SNORA4.4-201ENST00000515921 135 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.777-201ENST00000516982 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.771-201ENST00000598668 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 Y_RNA.789-201ENST00000622480 102 ntBASIC2.87□□□□□ -1.95
DDX53Q86TM3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 314.7 ms