Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-342P-201ENST00000384521 104 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 AC009237.7-201ENST00000447357 229 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 RPL30P15-201ENST00000457129 321 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 AC097473.1-201ENST00000508142 408 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 SNORA25.14-201ENST00000516481 132 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 RNA5SP54-201ENST00000516951 92 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 AC093027.1-201ENST00000546698 429 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 RRN3P3-201ENST00000549207 578 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 MIR5690-201ENST00000583739 73 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NPHP3Q7Z494 RPL17P51-201ENST00000605218 238 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 MIR6788-201ENST00000618842 66 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.82□□□□□ -2.12
NPHP3Q7Z494 MIR6767-201ENST00000637302 66 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.58-201ENST00000362807 102 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.154-201ENST00000363624 102 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 RNA5SP325-201ENST00000363756 130 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.263-201ENST00000364659 114 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 RNY3P1-201ENST00000365085 102 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 RNY3-201ENST00000365484 102 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.387-201ENST00000383918 102 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.490-201ENST00000384413 102 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 RNU6-159P-201ENST00000391080 106 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.81□□□□□ -2.12
NPHP3Q7Z494 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.81□□□□□ -2.12
NPHP3Q7Z494 AC016925.1-201ENST00000458303 298 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 AC010531.2-201ENST00000465012 153 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 HMGB3P17-201ENST00000504195 649 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.706-201ENST00000516933 99 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 RNU1-117P-201ENST00000517041 158 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 AC134698.4-201ENST00000523451 826 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 AC022254.1-201ENST00000567857 235 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 MIR3169-201ENST00000578032 83 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 AC025253.1-201ENST00000613623 543 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 LINC02555-201ENST00000563933 1951 ntBASIC1.81□□□□□ -2.12
NPHP3Q7Z494 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NPHP3Q7Z494 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPHP3Q7Z494 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.67-201ENST00000362870 100 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 RNU6-99P-201ENST00000364721 107 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 RNU6-1080P-201ENST00000383982 107 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 RNU6-890P-201ENST00000384121 107 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 MIR10B-201ENST00000385011 110 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 SNORA48.1-201ENST00000390879 135 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NPHP3Q7Z494 MIR1283-1-201ENST00000408494 87 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 AC016717.1-201ENST00000448918 286 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 RNU7-87P-201ENST00000459343 62 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 AC092991.1-201ENST00000477176 376 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 AC023790.1-201ENST00000482174 347 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 FGF7P4-201ENST00000509595 295 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NPHP3Q7Z494 RNVU1-2-201ENST00000516326 135 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 MIR5695-201ENST00000579717 85 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 AC005899.2-201ENST00000584353 90 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 AC100812.1-201ENST00000607622 580 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 MIR1244-1-201ENST00000612829 85 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 MIR1244-3-201ENST00000635744 85 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 MIR1244-2-201ENST00000636449 85 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 MIR1244-4-202ENST00000636813 85 ntBASIC1.8□□□□□ -2.12
NPHP3Q7Z494 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NPHP3Q7Z494 MTND5P16-201ENST00000460269 1703 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.132-201ENST00000363421 102 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 RNU6-727P-201ENST00000363592 107 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 SNORD114-27-201ENST00000363766 70 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 RNU6-1305P-201ENST00000364353 104 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.384-201ENST00000383909 102 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 RNU6-203P-201ENST00000384038 104 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 SNORA67.2-201ENST00000384300 149 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 RNU6-1297P-201ENST00000384415 104 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 RNU6-700P-201ENST00000391043 107 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 MIR190B-201ENST00000401119 79 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 AL033519.2-201ENST00000403958 392 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 RNA5SP504-201ENST00000410676 117 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 AC092423.1-201ENST00000430165 186 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 MTCO1P44-201ENST00000441935 243 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.79□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.653-201ENST00000459091 95 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 U8.22-201ENST00000459141 133 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.632-201ENST00000459189 102 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 RPL17P19-201ENST00000489069 552 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 AC022493.2-201ENST00000506122 481 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 RNU6-1198P-201ENST00000516904 67 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.718-201ENST00000517110 102 ntBASIC1.79□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.259-201ENST00000364619 101 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 SNORD87-201ENST00000364849 89 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 MIR598-201ENST00000384868 97 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 SNORA75.6-201ENST00000391318 127 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 MTCYBP4-201ENST00000401524 249 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 MIR320B2-201ENST00000408479 138 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 AC009310.1-201ENST00000414414 451 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.78□□□□□ -2.12
NPHP3Q7Z494 ATP5J2P3-201ENST00000451550 258 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.78□□□□□ -2.12
NPHP3Q7Z494 HMGN2P9-201ENST00000476875 229 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 MIR4753-201ENST00000585119 83 ntBASIC1.78□□□□□ -2.12
NPHP3Q7Z494 AC084781.2-201ENST00000615568 161 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms