Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 RNU6-699P-201ENST00000517081 110 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 MIR5094-201ENST00000578766 85 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 AC069114.2-201ENST00000604699 304 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 AC006001.4-201ENST00000622243 395 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 MIR338-201ENST00000636369 67 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 AC245060.5-201ENST00000610778 3293 ntBASIC1.76□□□□□ -2.13
NUP54Q7Z3B4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 RNU1-96P-201ENST00000364163 162 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 AC016909.1-201ENST00000415916 166 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 AC007677.1-201ENST00000445757 515 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 PCNPP5-201ENST00000452246 481 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 HMGN1P13-201ENST00000505795 138 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 RNU6-911P-201ENST00000516523 104 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.75□□□□□ -2.13
NUP54Q7Z3B4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 MIR424-201ENST00000362227 98 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 RNU6-1115P-201ENST00000362490 106 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 RNU6-414P-201ENST00000363705 104 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.315-201ENST00000365117 102 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 MIR515-2-201ENST00000384883 83 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 MIR515-1-201ENST00000384884 83 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 MIR1253-201ENST00000408273 105 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 ELOCP21-201ENST00000412558 336 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 FTH1P12-201ENST00000432137 551 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 HMGN2P34-201ENST00000437647 269 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 RNU6-107P-201ENST00000516643 102 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 SNORA31.17-201ENST00000516953 127 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 MIR4298-201ENST00000584380 73 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 AC016925.2-201ENST00000605108 242 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 AL357075.2-201ENST00000614906 189 ntBASIC1.74□□□□□ -2.13
NUP54Q7Z3B4 MIR126-201ENST00000362291 85 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.605-201ENST00000410577 105 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 SNORD116.3-201ENST00000517176 78 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 SNRPGP19-201ENST00000603826 189 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 AC138305.3-201ENST00000624988 240 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
NUP54Q7Z3B4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 MIR410-201ENST00000362222 80 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 RNU6-1266P-201ENST00000362794 105 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 RNU6-112P-201ENST00000363599 104 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 SNORA72.2-201ENST00000365028 127 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 RNU6-338P-201ENST00000383888 105 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 RNY3P4-201ENST00000384428 101 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 MIR583-201ENST00000384846 75 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 RNU2-20P-201ENST00000410425 191 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 SNORD12B-201ENST00000410433 91 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 RNU7-169P-201ENST00000459456 61 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 AC010409.1-201ENST00000487382 476 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 SNORA40.9-201ENST00000515895 93 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 RNU6-976P-201ENST00000516086 111 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 AL442163.3-201ENST00000554110 156 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 AC110588.1-201ENST00000559699 137 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 C8orf59P2-201ENST00000603441 271 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 AL133255.1-201ENST00000606374 441 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 U2.1-201ENST00000618978 145 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 AC091925.1-201ENST00000623204 462 ntBASIC1.72□□□□□ -2.13
NUP54Q7Z3B4 Y_RNA.252-201ENST00000364556 101 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.431-201ENST00000384086 102 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.509-201ENST00000384506 99 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 RNU6-417P-201ENST00000384712 107 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 U8.13-201ENST00000390842 128 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.579-201ENST00000390939 94 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 SNORA40.18-201ENST00000391200 128 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.604-201ENST00000410574 102 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 AC245047.4-201ENST00000433189 144 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 RNU6-625P-201ENST00000459412 107 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 RNU6-970P-201ENST00000516312 107 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 AC018448.1-201ENST00000552843 316 ntBASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 AC022432.1-201ENST00000595739 310 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms