Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RPS23P4-201ENST00000487908 423 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 RNU6-344P-201ENST00000516635 111 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 RNU6-107P-201ENST00000516643 102 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 AK6P2-201ENST00000549020 471 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 FRG2DP-202ENST00000566967 323 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 SNORA4-201ENST00000584302 138 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 AC022217.4-201ENST00000604389 163 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 AC245008.1-201ENST00000608123 476 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 AL021879.1-201ENST00000611756 288 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 U6.108-201ENST00000637764 58 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 MTND4P12-201ENST00000498999 1377 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.48-201ENST00000362710 103 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 RNU6-451P-201ENST00000362921 107 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 MIR520E-201ENST00000384867 87 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 AC008134.1-201ENST00000420943 193 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 MTATP6P13-201ENST00000438531 667 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 RNU6-221P-201ENST00000459541 99 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 AC091179.3-201ENST00000474761 144 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 TRBVA-201ENST00000498804 316 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 RNA5SP54-201ENST00000516951 92 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 MIR3942-201ENST00000585264 109 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 FAM106DP-201ENST00000586416 501 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 AL359075.3-201ENST00000613288 217 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 AC009248.2-201ENST00000619826 254 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 AC024614.3-201ENST00000637860 256 ntBASIC0.91□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.212-201ENST00000364177 102 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 RNU6-1031P-201ENST00000384773 107 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 MIR153-2-201ENST00000385225 87 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 AC245047.3-201ENST00000429428 127 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 MTCO2P7-201ENST00000446518 666 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 RNU7-66P-201ENST00000459469 62 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 SNORD116-28-201ENST00000516123 91 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 RNU6-506P-201ENST00000516553 94 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 SNORA70.22-201ENST00000517160 124 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 AC027288.2-201ENST00000553028 243 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 MIR5695-201ENST00000579717 85 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 MIR4273-201ENST00000582824 84 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 AC124303.1-201ENST00000605703 360 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 MIR8054-201ENST00000620877 86 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 AC008873.1-201ENST00000625051 138 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 AC100810.6-201ENST00000638068 285 ntBASIC0.9□□□□□ -2.27
H3F3CQ6NXT2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 RNU6-1059P-201ENST00000363752 98 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 RNY3P3-201ENST00000363816 102 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.508-201ENST00000384502 114 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.533-201ENST00000384596 114 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 RNU6-440P-201ENST00000390882 105 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 MIR1185-2-201ENST00000408687 86 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 AC016907.1-201ENST00000419483 435 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 AC024995.1-201ENST00000523014 93 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 AC023157.2-201ENST00000540596 141 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 AC090617.10-201ENST00000624308 134 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 MIR1321-201ENST00000637766 79 ntBASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
H3F3CQ6NXT2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 RNU6-1266P-201ENST00000362794 105 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.194-201ENST00000363985 102 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.405-201ENST00000383979 100 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.414-201ENST00000384011 101 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 RNU6-245P-201ENST00000384020 107 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.451-201ENST00000384200 100 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 RNY1P14-201ENST00000384426 108 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.524-201ENST00000384564 100 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.530-201ENST00000384587 101 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.561-201ENST00000384694 100 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 RPL39P38-201ENST00000467018 153 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 AP000870.1-201ENST00000472927 406 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 MIR4778-201ENST00000577635 80 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 AC012557.2-201ENST00000605919 418 ntBASIC0.88□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.179-201ENST00000363844 90 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 SNORD116-11-201ENST00000383882 92 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 RNU6-793P-201ENST00000384233 104 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 RN7SKP200-201ENST00000410564 320 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 DAP3P1-201ENST00000441522 278 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 RNU6-922P-201ENST00000516753 99 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 RNU6-1198P-201ENST00000516904 67 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 AC091144.1-201ENST00000519573 138 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms