Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.44□□□□□ -2.02
PPP4R4Q6NUP7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 AL136360.1-201ENST00000503377 1900 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.380-201ENST00000365663 111 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 MIR606-201ENST00000384851 96 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 AL590004.1-201ENST00000405321 300 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 U3.40-201ENST00000408706 208 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 SNORD65B-201ENST00000459126 73 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 RNA5SP282-201ENST00000516355 108 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 RNU6-1046P-201ENST00000516538 107 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 RNU6-897P-201ENST00000517135 105 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 AC022254.1-201ENST00000567857 235 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 AC005176.2-201ENST00000596933 147 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.772-201ENST00000606692 102 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.43□□□□□ -2.02
PPP4R4Q6NUP7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RNU6-862P-201ENST00000362804 105 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.439-201ENST00000384119 94 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RNU6-937P-201ENST00000384325 106 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RNU6-738P-201ENST00000384531 106 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RNU2-20P-201ENST00000410425 191 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RNU6-121P-201ENST00000410525 99 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RNA5SP100-201ENST00000410903 110 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RNA5SP59-201ENST00000410922 110 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 AC008134.1-201ENST00000420943 193 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 YWHAEP4-201ENST00000505390 198 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 RPL23AP94-201ENST00000512518 302 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 AC131281.1-201ENST00000522984 164 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 AL355297.3-201ENST00000604082 446 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 AC010900.2-201ENST00000604508 210 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
PPP4R4Q6NUP7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.26-201ENST00000362539 101 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.143-201ENST00000363520 106 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 SNORD115-30-201ENST00000364117 82 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.422-201ENST00000384054 114 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 Y_RNA.462-201ENST00000384268 102 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 RNA5SP475-201ENST00000410568 110 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 RNA5SP184-201ENST00000411071 108 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 ELOCP20-201ENST00000422460 345 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 AC063976.3-201ENST00000426849 329 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 AC073910.1-201ENST00000445047 438 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 RPL23AP6-201ENST00000446637 472 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 SNORD53-201ENST00000579969 78 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 AC006504.6-201ENST00000590142 199 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 AL096840.1-201ENST00000603287 93 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 AC022441.3-201ENST00000605737 136 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 U6.108-201ENST00000637764 58 ntBASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PPP4R4Q6NUP7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.214-201ENST00000364201 112 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 SNORA20B-201ENST00000384220 132 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 RPL21P1-201ENST00000399532 476 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 RNU2-54P-201ENST00000410299 190 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 RNA5SP21-201ENST00000410917 96 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 AC009963.1-201ENST00000417265 157 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 RNU7-128P-201ENST00000517247 62 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 MIR5094-201ENST00000578766 85 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.4□□□□□ -2.03
PPP4R4Q6NUP7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.183-201ENST00000363882 113 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.276-201ENST00000364732 109 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-806P-201ENST00000365147 105 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-1175P-201ENST00000365200 107 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 SNORD63-201ENST00000384262 68 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-417P-201ENST00000384712 107 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 SNORA11.4-201ENST00000408823 129 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 CST2P1-201ENST00000425770 87 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 MRPS17P9-201ENST00000511924 393 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 MIR4300-201ENST00000581016 96 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 AL360085.1-201ENST00000604713 532 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 AC116312.1-201ENST00000606841 314 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 AC245060.5-201ENST00000610778 3293 ntBASIC2.39□□□□□ -2.03
PPP4R4Q6NUP7 SNORD81.1-201ENST00000363064 77 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.124-201ENST00000363339 93 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 Y_RNA.210-201ENST00000364161 110 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 MIR548F4-201ENST00000408515 105 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AC245047.4-201ENST00000433189 144 ntBASIC2.38□□□□□ -2.03
PPP4R4Q6NUP7 AL121890.1-201ENST00000435457 205 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms