Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 Z82209.1-201ENST00000422141 2135 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
E4F1Q66K89 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.04□□□□□ -1.92
E4F1Q66K89 Y_RNA.170-201ENST00000363746 110 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 Y_RNA.182-201ENST00000363880 111 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 RNU6-899P-201ENST00000363947 107 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 Y_RNA.310-201ENST00000365063 113 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 RNU6-407P-201ENST00000365280 104 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 Y_RNA.361-201ENST00000365515 120 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 MIR592-201ENST00000384959 97 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 AL161788.1-201ENST00000441805 169 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.04□□□□□ -1.92
E4F1Q66K89 RNU6-826P-201ENST00000516827 104 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 RNA5SP490-201ENST00000517141 136 ntBASIC3.04□□□□□ -1.92
E4F1Q66K89 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
E4F1Q66K89 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
E4F1Q66K89 Y_RNA.172-201ENST00000363765 102 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
E4F1Q66K89 RNA5SP171-201ENST00000391071 115 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 MIR873-201ENST00000401120 77 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.03□□□□□ -1.92
E4F1Q66K89 HMGN2P18-201ENST00000450680 270 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 CYP2C59P-201ENST00000457790 269 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 SNORD65B-201ENST00000459126 73 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 RNU7-141P-201ENST00000459304 62 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 RNU6-221P-201ENST00000459541 99 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 RNU6-948P-201ENST00000516374 107 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 RNU6-789P-201ENST00000517105 102 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 AC021269.2-201ENST00000532318 330 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 AC022616.8-201ENST00000533569 253 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 MIR3670-2-201ENST00000582974 65 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 MIR3670-1-201ENST00000584160 65 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 MIR3670-3-201ENST00000584855 65 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 AC096577.2-201ENST00000611455 153 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 MIR3670-4-201ENST00000612260 65 ntBASIC3.03□□□□□ -1.92
E4F1Q66K89 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
E4F1Q66K89 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.03□□□□□ -1.92
E4F1Q66K89 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
E4F1Q66K89 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
E4F1Q66K89 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
E4F1Q66K89 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.02□□□□□ -1.93
E4F1Q66K89 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
E4F1Q66K89 AC068700.1-201ENST00000565862 3754 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
E4F1Q66K89 RNU1-23P-201ENST00000363361 144 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 RNU6-1205P-201ENST00000363625 106 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 RNA5SP72-201ENST00000364442 117 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 SNORA8.3-201ENST00000384679 139 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 RN7SKP27-201ENST00000410684 333 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.02□□□□□ -1.93
E4F1Q66K89 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.02□□□□□ -1.93
E4F1Q66K89 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.02□□□□□ -1.93
E4F1Q66K89 RPL23AP7-203ENST00000449021 469 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 AC016925.1-201ENST00000458303 298 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 AC010409.1-201ENST00000487382 476 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.02□□□□□ -1.93
E4F1Q66K89 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.02□□□□□ -1.93
E4F1Q66K89 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.02□□□□□ -1.93
E4F1Q66K89 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.02□□□□□ -1.93
E4F1Q66K89 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.02□□□□□ -1.93
E4F1Q66K89 MTND5P41-201ENST00000517498 206 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.02□□□□□ -1.93
E4F1Q66K89 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.02□□□□□ -1.93
E4F1Q66K89 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.02□□□□□ -1.93
E4F1Q66K89 MIR3144-201ENST00000579460 79 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 AC004832.4-201ENST00000608952 331 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 AC068647.2-201ENST00000637380 353 ntBASIC3.02□□□□□ -1.93
E4F1Q66K89 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
E4F1Q66K89 Y_RNA.412-201ENST00000384001 104 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 MIR518C-201ENST00000384822 101 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 MIR7-3-201ENST00000384898 110 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 SNORA48.7-201ENST00000391302 135 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 RNU6-1135P-201ENST00000411083 103 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 AL392103.1-201ENST00000447000 198 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 AC080013.2-201ENST00000460866 323 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 Y_RNA.797-201ENST00000515977 94 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 RNU6-1337P-201ENST00000516525 95 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.01□□□□□ -1.93
E4F1Q66K89 MIR6075-201ENST00000620782 95 ntBASIC3.01□□□□□ -1.93
E4F1Q66K89 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
E4F1Q66K89 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
E4F1Q66K89 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
E4F1Q66K89 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3□□□□□ -1.93
E4F1Q66K89 AC009487.2-201ENST00000420969 6821 ntBASIC3□□□□□ -1.93
E4F1Q66K89 Y_RNA.24-201ENST00000362508 103 ntBASIC3□□□□□ -1.93
E4F1Q66K89 SNORA27.1-201ENST00000362604 124 ntBASIC3□□□□□ -1.93
E4F1Q66K89 RNU6-271P-201ENST00000363858 105 ntBASIC3□□□□□ -1.93
E4F1Q66K89 RNA5SP240-201ENST00000365355 128 ntBASIC3□□□□□ -1.93
E4F1Q66K89 Y_RNA.398-201ENST00000383952 99 ntBASIC3□□□□□ -1.93
E4F1Q66K89 Y_RNA.572-201ENST00000384757 98 ntBASIC3□□□□□ -1.93
E4F1Q66K89 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3□□□□□ -1.93
E4F1Q66K89 RNU6-381P-201ENST00000391259 108 ntBASIC3□□□□□ -1.93
E4F1Q66K89 AL355497.1-201ENST00000406262 551 ntBASIC3□□□□□ -1.93
E4F1Q66K89 RNU6-394P-201ENST00000410735 107 ntBASIC3□□□□□ -1.93
E4F1Q66K89 RNU2-63P-201ENST00000410792 194 ntBASIC3□□□□□ -1.93
E4F1Q66K89 RNU5E-9P-201ENST00000411164 104 ntBASIC3□□□□□ -1.93
E4F1Q66K89 AL139132.1-201ENST00000431587 344 ntBASIC3□□□□□ -1.93
E4F1Q66K89 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms