Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VARS2Q5ST30 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARS2Q5ST30 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VARS2Q5ST30 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARS2Q5ST30 SNORA9-201ENST00000384215 133 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 MIR522-201ENST00000385071 87 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 RNU6-613P-201ENST00000410412 108 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.44□□□□□ -1.7
VARS2Q5ST30 AC087499.4-201ENST00000448505 178 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 MIR1270-201ENST00000459320 83 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 SNORA31.4-201ENST00000516049 129 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 AL138721.1-201ENST00000616756 179 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 MIR7151-201ENST00000617477 60 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 SEPT14P17-201ENST00000617978 177 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 AC021613.1-201ENST00000623880 111 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.44□□□□□ -1.7
VARS2Q5ST30 UBE3AP2-201ENST00000429033 2259 ntBASIC4.44□□□□□ -1.7
VARS2Q5ST30 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VARS2Q5ST30 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARS2Q5ST30 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
VARS2Q5ST30 AC008163.1-202ENST00000636004 2889 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VARS2Q5ST30 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VARS2Q5ST30 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VARS2Q5ST30 RNU6-1244P-201ENST00000363614 108 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 RNU6-234P-201ENST00000365229 104 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 RNU6-442P-201ENST00000383968 104 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 MIR147B-201ENST00000390185 80 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 DBIP2-201ENST00000419076 262 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 SNX2P2-201ENST00000424553 323 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 SNRPGP14-201ENST00000435400 219 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 AC069257.2-201ENST00000441819 155 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 RPL36AP48-201ENST00000485521 314 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 RNU2-34P-201ENST00000516534 121 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 RNU6-1291P-201ENST00000516591 104 ntBASIC4.43□□□□□ -1.7
VARS2Q5ST30 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.43□□□□□ -1.7
VARS2Q5ST30 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VARS2Q5ST30 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VARS2Q5ST30 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARS2Q5ST30 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARS2Q5ST30 AL133412.1-201ENST00000380194 2992 ntBASIC4.42□□□□□ -1.7
VARS2Q5ST30 AC093831.2-201ENST00000624393 3427 ntBASIC4.42□□□□□ -1.7
VARS2Q5ST30 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VARS2Q5ST30 RNU6-268P-201ENST00000364174 107 ntBASIC4.42□□□□□ -1.7
VARS2Q5ST30 HDGFP1-201ENST00000405943 252 ntBASIC4.42□□□□□ -1.7
VARS2Q5ST30 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.42□□□□□ -1.7
VARS2Q5ST30 AL450471.1-201ENST00000447509 127 ntBASIC4.42□□□□□ -1.7
VARS2Q5ST30 IFNWP4-201ENST00000453148 294 ntBASIC4.42□□□□□ -1.7
VARS2Q5ST30 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.42□□□□□ -1.7
VARS2Q5ST30 MIR6715B-201ENST00000637172 77 ntBASIC4.42□□□□□ -1.7
VARS2Q5ST30 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARS2Q5ST30 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.42□□□□□ -1.7
VARS2Q5ST30 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VARS2Q5ST30 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
VARS2Q5ST30 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VARS2Q5ST30 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VARS2Q5ST30 SNORD115-2-201ENST00000362842 82 ntBASIC4.41□□□□□ -1.7
VARS2Q5ST30 SNORD115-20-201ENST00000365099 82 ntBASIC4.41□□□□□ -1.7
VARS2Q5ST30 RNU6-296P-201ENST00000384608 107 ntBASIC4.41□□□□□ -1.7
VARS2Q5ST30 MIR1294-201ENST00000408503 142 ntBASIC4.41□□□□□ -1.7
VARS2Q5ST30 AC112771.1-201ENST00000463581 102 ntBASIC4.41□□□□□ -1.7
VARS2Q5ST30 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.41□□□□□ -1.7
VARS2Q5ST30 SNORA25.13-201ENST00000516395 103 ntBASIC4.41□□□□□ -1.7
VARS2Q5ST30 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.41□□□□□ -1.7
VARS2Q5ST30 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VARS2Q5ST30 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.4□□□□□ -1.7
VARS2Q5ST30 MIR342-201ENST00000362212 99 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 RNU6-624P-201ENST00000363411 107 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 AC093578.1-201ENST00000415219 368 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 AL445685.2-201ENST00000422551 342 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 AC006011.1-201ENST00000442758 349 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.4□□□□□ -1.71
VARS2Q5ST30 RNU7-113P-201ENST00000459273 62 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 UBL5P1-201ENST00000507979 193 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 AC007179.3-201ENST00000604976 235 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 SNORA51-201ENST00000606420 132 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 AC090115.4-201ENST00000609970 188 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.4□□□□□ -1.71
VARS2Q5ST30 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VARS2Q5ST30 AC073308.1-201ENST00000623696 305 ntBASIC4.4□□□□□ -1.71
VARS2Q5ST30 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
VARS2Q5ST30 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VARS2Q5ST30 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
VARS2Q5ST30 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.39□□□□□ -1.71
VARS2Q5ST30 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VARS2Q5ST30 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VARS2Q5ST30 Y_RNA.171-201ENST00000363760 102 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 SNORD38.1-201ENST00000363863 68 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 MIR491-201ENST00000384877 84 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 RNA5SP239-201ENST00000410218 129 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 HMGN2P31-201ENST00000432430 273 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.39□□□□□ -1.71
VARS2Q5ST30 RNU6-634P-201ENST00000459134 106 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 AC084357.1-201ENST00000473404 255 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 SNORA74D-201ENST00000516404 141 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 AL358944.1-201ENST00000528537 144 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms