Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MRPL35P1-201ENST00000404272 572 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 RNU4-53P-201ENST00000410828 140 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 RNA5SP100-201ENST00000410903 110 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 RNA5SP59-201ENST00000410922 110 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 AC009310.1-201ENST00000414414 451 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 AL160004.2-201ENST00000432935 350 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC38Q502W7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC38Q502W7 RNA5SP57-201ENST00000459463 123 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 RNU6-408P-201ENST00000515910 100 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 RNU6-475P-201ENST00000516073 104 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC38Q502W7 AC022432.1-201ENST00000595739 310 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 ZNF72P-201ENST00000425869 1908 ntBASIC2.2□□□□□ -2.06
CCDC38Q502W7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC38Q502W7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 AL135786.1-201ENST00000415892 214 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC38Q502W7 SDAD1P3-201ENST00000427380 333 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC38Q502W7 RPL26P26-201ENST00000480251 434 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC38Q502W7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC38Q502W7 GNAI2P1-201ENST00000541815 315 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC38Q502W7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC38Q502W7 SNORD58B-201ENST00000607313 66 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 AL627230.6-201ENST00000611129 280 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC38Q502W7 U6.92-201ENST00000636464 89 ntBASIC2.19□□□□□ -2.06
CCDC38Q502W7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC38Q502W7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
CCDC38Q502W7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC38Q502W7 Y_RNA.11-201ENST00000362375 109 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 Y_RNA.128-201ENST00000363391 112 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 SNORA72.2-201ENST00000365028 127 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 RNU6-708P-201ENST00000384217 107 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 MCFD2P1-201ENST00000417812 300 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC38Q502W7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC38Q502W7 SNORD65B-201ENST00000459126 73 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 Y_RNA.631-201ENST00000459607 101 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 RN7SKP295-201ENST00000517264 153 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC38Q502W7 HSBP1P1-201ENST00000555205 166 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 MIR4659A-201ENST00000580269 81 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 RPS29P30-201ENST00000600975 111 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 AC010900.2-201ENST00000604508 210 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 AC007485.1-201ENST00000616755 206 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 AC006435.5-201ENST00000624486 112 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 AC134503.1-201ENST00000633048 54 ntBASIC2.18□□□□□ -2.06
CCDC38Q502W7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CCDC38Q502W7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC38Q502W7 RNU6-112P-201ENST00000363599 104 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 RNU6-961P-201ENST00000363893 105 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 Y_RNA.394-201ENST00000383942 103 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 Y_RNA.526-201ENST00000384572 110 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 MTND4P19-201ENST00000446659 478 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 AC010469.2-201ENST00000496412 480 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 AC093852.1-201ENST00000503587 266 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC38Q502W7 AC010598.1-201ENST00000510378 103 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 AP002001.1-203ENST00000534002 267 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 AL137100.2-201ENST00000555786 315 ntBASIC2.17□□□□□ -2.06
CCDC38Q502W7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC38Q502W7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC38Q502W7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC38Q502W7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC38Q502W7 RNU6-474P-201ENST00000384243 107 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 MIR1302-11-201ENST00000408051 138 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 SNORA3.2-201ENST00000408221 125 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 MIR1302-9-201ENST00000408365 138 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 MIR1302-10-201ENST00000408734 138 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 RNA5SP425-201ENST00000410336 112 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 Z98742.3-201ENST00000418637 326 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 PMCHL1-202ENST00000423102 261 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC245047.4-201ENST00000433189 144 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC069257.2-201ENST00000441819 155 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC112492.4-201ENST00000456549 352 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC010409.1-201ENST00000487382 476 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 MRPS17P9-201ENST00000511924 393 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 SNORA25.10-201ENST00000515926 124 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC024995.1-201ENST00000523014 93 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC084364.2-201ENST00000546924 395 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC012493.3-201ENST00000604494 112 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 MIR1302-2-201ENST00000607096 138 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 AC240442.1-201ENST00000616055 283 ntBASIC2.16□□□□□ -2.06
CCDC38Q502W7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC38Q502W7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms