Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC104260.1-201ENST00000616660 539 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 MIR499B-201ENST00000636498 73 ntBASIC-0.9□□□□□ -2.55
CCDC58Q4VC31 SNORD56.2-201ENST00000363242 71 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 RPS26P42-201ENST00000413485 326 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 ZNF885P-201ENST00000420174 1098 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 AC114755.3-201ENST00000481111 251 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 RNU6-848P-201ENST00000515948 107 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 RNU6-617P-201ENST00000516147 107 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 RNU6-473P-201ENST00000516164 107 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 AC023442.1-201ENST00000531247 422 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 AP002004.2-201ENST00000531656 154 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 MIR4438-201ENST00000585271 93 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 AC096720.1-201ENST00000604441 183 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 MIR4788-201ENST00000639104 80 ntBASIC-0.91□□□□□ -2.56
CCDC58Q4VC31 SNORA1B-201ENST00000362535 133 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 RNU6-934P-201ENST00000365154 107 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 RNU6-224P-201ENST00000384055 107 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 MIR760-201ENST00000390220 80 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 AL136310.1-201ENST00000404926 654 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 RNA5SP163-201ENST00000410304 99 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 MTND4P3-201ENST00000417829 541 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 USP9YP21-201ENST00000420603 432 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 RPS29P27-201ENST00000463711 170 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 RNU6-685P-201ENST00000517088 95 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 RNU6-201P-201ENST00000517100 61 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 RN7SL660P-201ENST00000614852 299 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.92□□□□□ -2.56
CCDC58Q4VC31 RNA5SP257-201ENST00000363023 116 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 RNU6-137P-201ENST00000363680 108 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 RNU6-674P-201ENST00000363831 107 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 RNU6-723P-201ENST00000383973 107 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 AL355143.1-201ENST00000407101 841 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 MTND2P38-201ENST00000522536 667 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 FRG2DP-202ENST00000566967 323 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 MIR4771-2-201ENST00000577758 74 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 MIR4771-1-201ENST00000582617 74 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 AC121334.2-201ENST00000605387 271 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 AC027279.3-201ENST00000625055 122 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 AC099786.3-201ENST00000565735 1410 ntBASIC-0.93□□□□□ -2.56
CCDC58Q4VC31 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 RNU6-298P-201ENST00000390888 96 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 MRPS10P1-201ENST00000448483 130 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 AC079354.2-201ENST00000453523 154 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 RNU6-341P-201ENST00000516973 96 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 MIR4676-201ENST00000583078 72 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 AC005776.1-201ENST00000603164 290 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 AC246785.4-201ENST00000605374 287 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 AC006504.8-201ENST00000621046 635 ntBASIC-0.94□□□□□ -2.56
CCDC58Q4VC31 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 RNA5SP98-201ENST00000363158 137 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 RNU6-61P-201ENST00000365528 109 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 RNU6-187P-201ENST00000384139 106 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 RNU6-480P-201ENST00000384332 107 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 AL049545.1-201ENST00000401856 572 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 AC007327.1-201ENST00000447461 264 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 MTND1P17-201ENST00000448961 204 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 AC010493.1-201ENST00000513479 292 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 RNU6-180P-201ENST00000516697 61 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 AC007751.1-201ENST00000529260 376 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 AC090897.1-201ENST00000580909 226 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 MIR4432-201ENST00000581823 84 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 AC012433.1-201ENST00000588916 398 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 AC120024.3-201ENST00000603167 156 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 Pinc.1-201ENST00000616452 154 ntBASIC-0.95□□□□□ -2.56
CCDC58Q4VC31 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 SNORD114-11-201ENST00000363738 75 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 MIR329-1-201ENST00000385028 80 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 RNU6-387P-201ENST00000411331 105 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 AC098592.1-201ENST00000419352 333 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 RPS24P1-201ENST00000438550 371 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 RNU6-897P-201ENST00000517135 105 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 MTND3P13-201ENST00000574391 343 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 MIR4493-201ENST00000584016 73 ntBASIC-0.96□□□□□ -2.56
CCDC58Q4VC31 MIR377-201ENST00000362145 69 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 RNU4-9P-201ENST00000364951 139 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 RNU6-580P-201ENST00000365159 107 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 MIR15B-201ENST00000385045 98 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 SNORA26-201ENST00000391286 122 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 RNU6-735P-201ENST00000410612 107 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 AC015818.7-201ENST00000428754 109 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms