Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC039056.2-201ENST00000622261 511 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 MIR1248-201ENST00000629190 106 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 AC009093.8-201ENST00000641769 292 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDH1Q08174 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
PCDH1Q08174 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDH1Q08174 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
PCDH1Q08174 RNU6-978P-201ENST00000364371 103 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 Y_RNA.525-201ENST00000384570 113 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 RNU6-1328P-201ENST00000410938 106 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 EEF1B2P7-201ENST00000451177 676 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 AC090515.1-201ENST00000465295 476 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 AC106707.2-201ENST00000484182 374 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDH1Q08174 RNA5SP76-201ENST00000516277 87 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 Y_RNA.712-201ENST00000517011 92 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 Y_RNA.757-201ENST00000578934 114 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 AC090115.4-201ENST00000609970 188 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDH1Q08174 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
PCDH1Q08174 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH1Q08174 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH1Q08174 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
PCDH1Q08174 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH1Q08174 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDH1Q08174 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH1Q08174 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PCDH1Q08174 MIR208A-201ENST00000362287 71 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 RNA5SP124-201ENST00000362739 110 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 RNU1-22P-201ENST00000363334 158 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 Y_RNA.203-201ENST00000364106 102 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 SNORD46.1-201ENST00000364139 104 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 RNA5SP139-201ENST00000364340 117 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDH1Q08174 SNORA5A-201ENST00000384111 134 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 U6atac.2-201ENST00000408644 118 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 RNU6-1064P-201ENST00000410626 104 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDH1Q08174 AC110768.1-201ENST00000509222 400 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 RNA5SP490-201ENST00000517141 136 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 MIR2681-201ENST00000581814 105 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 MIR7157-201ENST00000635801 60 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDH1Q08174 AC012442.3-202ENST00000636742 206 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 AL391516.1-201ENST00000554380 2449 ntBASIC3.35□□□□□ -1.87
PCDH1Q08174 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
PCDH1Q08174 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH1Q08174 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH1Q08174 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDH1Q08174 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PCDH1Q08174 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDH1Q08174 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDH1Q08174 AC017071.1-201ENST00000564407 2204 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 Y_RNA.294-201ENST00000364916 102 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 RNU6-546P-201ENST00000383991 107 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 MIR218-1-201ENST00000384999 110 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDH1Q08174 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDH1Q08174 RPS4XP11-201ENST00000446897 772 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 AC023449.1-201ENST00000454464 154 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 AC097462.1-201ENST00000514125 324 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 RNA5SP153-201ENST00000516498 76 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 SCARNA3-201ENST00000517097 143 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 NDUFB9P3-201ENST00000521269 501 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDH1Q08174 RPL23AP91-201ENST00000569211 455 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 MIR4438-201ENST00000585271 93 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 AC019176.2-201ENST00000611579 315 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 uc_338.4-201ENST00000616635 176 ntBASIC3.34□□□□□ -1.87
PCDH1Q08174 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDH1Q08174 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
PCDH1Q08174 SNORA71.3-201ENST00000362582 128 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 RNU6-235P-201ENST00000362644 107 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 RNU2-32P-201ENST00000411193 191 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDH1Q08174 AC245102.2-201ENST00000448956 180 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH1Q08174 SNORD77.4-201ENST00000516158 81 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 RNU7-172P-201ENST00000517125 64 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 AC105245.1-201ENST00000581934 244 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 MIR3199-1-201ENST00000582434 88 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 MIR3117-201ENST00000584034 78 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 MIR7515-201ENST00000637837 67 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 AC103988.1-201ENST00000566382 2177 ntBASIC3.33□□□□□ -1.88
PCDH1Q08174 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH1Q08174 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PCDH1Q08174 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH1Q08174 MIR30E-201ENST00000362104 92 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 RNU6-476P-201ENST00000384726 107 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 RNU2-70P-201ENST00000410718 179 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 AL158823.1-201ENST00000418441 478 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 AC009969.1-201ENST00000438726 172 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 RPL23AP67-201ENST00000465341 474 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 RPL27AP5-201ENST00000469428 449 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms