Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC010469.2-201ENST00000496412 480 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 SCARNA16.2-201ENST00000516520 172 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.46□□□□□ -2.18
SCN1BQ07699 AC004584.2-201ENST00000570407 410 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.46□□□□□ -2.18
SCN1BQ07699 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 RNU6-1123P-201ENST00000362347 106 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 SNORD114-1-201ENST00000362705 72 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 RNA5SP126-201ENST00000365092 109 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 Y_RNA.358-201ENST00000365491 99 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 RNU6-1264P-201ENST00000383891 107 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 MIR9-3-201ENST00000385084 90 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 SNORA75.4-201ENST00000391278 119 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 MRPL42P3-201ENST00000401492 326 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN1BQ07699 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN1BQ07699 RNA5SP182-201ENST00000516064 82 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 RNU6-1213P-201ENST00000517075 94 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 AC022868.1-201ENST00000517767 391 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN1BQ07699 SUB1P3-201ENST00000564581 315 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 uc_338.5-201ENST00000611839 155 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
SCN1BQ07699 AC073544.1-201ENST00000600110 1595 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 Y_RNA.248-201ENST00000364501 109 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 RNU6-440P-201ENST00000390882 105 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 SNX2P2-201ENST00000424553 323 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 UBE2V1P7-201ENST00000446395 340 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 AC010598.1-201ENST00000510378 103 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 SUMO2P16-201ENST00000519475 264 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 AL390123.1-201ENST00000603216 237 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 AC073413.2-201ENST00000604332 360 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 AC092794.1-201ENST00000612734 582 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 MIR1244-1-201ENST00000612829 85 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 AC104260.1-201ENST00000616660 539 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 AC006435.5-201ENST00000624486 112 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 MIR1244-3-201ENST00000635744 85 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 MIR1244-2-201ENST00000636449 85 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 MIR1244-4-202ENST00000636813 85 ntBASIC1.44□□□□□ -2.18
SCN1BQ07699 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SCN1BQ07699 Y_RNA.279-201ENST00000364763 95 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 RNU6-876P-201ENST00000391295 104 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 ELOCP21-201ENST00000412558 336 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 RPL30P13-201ENST00000418873 348 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 RNU7-94P-201ENST00000459576 63 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 RPL31P58-201ENST00000469001 379 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 AC116353.2-201ENST00000505332 712 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 CYCSP23-201ENST00000519781 313 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.43□□□□□ -2.18
SCN1BQ07699 AC005899.2-201ENST00000584353 90 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 PRR13P7-201ENST00000605538 430 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 AL021879.1-201ENST00000611756 288 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 AC092794.2-201ENST00000620933 563 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 AC099654.5-201ENST00000636479 350 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 AL669831.3-213ENST00000636676 183 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 ZNF355P-201ENST00000427301 3216 ntBASIC1.43□□□□□ -2.18
SCN1BQ07699 RNU6-845P-201ENST00000362578 103 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 SNORA20B-201ENST00000384220 132 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 RNU6-1145P-201ENST00000384246 107 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 SNORA12.1-201ENST00000390873 148 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 AL355796.1-201ENST00000406706 323 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 UBL5P3-201ENST00000475112 231 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.42□□□□□ -2.18
SCN1BQ07699 AC097462.1-201ENST00000514125 324 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 RNU6-307P-201ENST00000516743 106 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.42□□□□□ -2.18
SCN1BQ07699 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SCN1BQ07699 AC018630.2-201ENST00000534866 2403 ntBASIC1.42□□□□□ -2.18
SCN1BQ07699 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SCN1BQ07699 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 Y_RNA.505-201ENST00000384489 102 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 AL034345.1-201ENST00000407768 123 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 RNU4-14P-201ENST00000410858 122 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.41□□□□□ -2.18
SCN1BQ07699 OOSP1P1-201ENST00000423265 274 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 STAG3L5P-204ENST00000443759 179 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 PGBD4P5-201ENST00000445958 426 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.41□□□□□ -2.18
SCN1BQ07699 RPL17P19-201ENST00000489069 552 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 RNU7-172P-201ENST00000517125 64 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.41□□□□□ -2.18
SCN1BQ07699 AC018448.1-201ENST00000552843 316 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.41□□□□□ -2.18
SCN1BQ07699 RNU1-22P-201ENST00000363334 158 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 RNU6-407P-201ENST00000365280 104 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 RNU6-318P-201ENST00000384283 103 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 Y_RNA.498-201ENST00000384460 102 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 MT-TL1-201ENST00000386347 75 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 PDCL2P1-201ENST00000419302 352 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 MTND1P2-201ENST00000430604 821 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms