Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.28□□□□□ -2.04
LTBQ06643 SUMO1P2-201ENST00000452524 304 ntBASIC2.28□□□□□ -2.04
LTBQ06643 SNORA27.4-201ENST00000516650 95 ntBASIC2.28□□□□□ -2.04
LTBQ06643 Y_RNA.700-201ENST00000516806 100 ntBASIC2.28□□□□□ -2.04
LTBQ06643 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.28□□□□□ -2.04
LTBQ06643 MIR3145-201ENST00000580727 82 ntBASIC2.28□□□□□ -2.04
LTBQ06643 MIR5092-201ENST00000583139 88 ntBASIC2.28□□□□□ -2.04
LTBQ06643 AC011921.3-201ENST00000605540 361 ntBASIC2.28□□□□□ -2.04
LTBQ06643 AC005562.2-201ENST00000618264 111 ntBASIC2.28□□□□□ -2.04
LTBQ06643 AC069528.2-201ENST00000624849 1991 ntBASIC2.28□□□□□ -2.04
LTBQ06643 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
LTBQ06643 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
LTBQ06643 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.27□□□□□ -2.05
LTBQ06643 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
LTBQ06643 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
LTBQ06643 SNORA25.1-201ENST00000362326 128 ntBASIC2.27□□□□□ -2.05
LTBQ06643 Y_RNA.150-201ENST00000363562 102 ntBASIC2.27□□□□□ -2.05
LTBQ06643 Y_RNA.199-201ENST00000364014 102 ntBASIC2.27□□□□□ -2.05
LTBQ06643 RNY4P28-201ENST00000365281 93 ntBASIC2.27□□□□□ -2.05
LTBQ06643 RNU6-1083P-201ENST00000384022 107 ntBASIC2.27□□□□□ -2.05
LTBQ06643 RNU4-70P-201ENST00000384579 139 ntBASIC2.27□□□□□ -2.05
LTBQ06643 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.27□□□□□ -2.05
LTBQ06643 EIF4EP4-201ENST00000424916 578 ntBASIC2.27□□□□□ -2.05
LTBQ06643 AC092427.1-202ENST00000430569 476 ntBASIC2.27□□□□□ -2.05
LTBQ06643 RPS12P2-201ENST00000439728 269 ntBASIC2.27□□□□□ -2.05
LTBQ06643 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.27□□□□□ -2.05
LTBQ06643 AC005042.3-201ENST00000453230 174 ntBASIC2.27□□□□□ -2.05
LTBQ06643 CKS1BP2-201ENST00000497342 240 ntBASIC2.27□□□□□ -2.05
LTBQ06643 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.27□□□□□ -2.05
LTBQ06643 RNU2-44P-201ENST00000516795 194 ntBASIC2.27□□□□□ -2.05
LTBQ06643 RN7SKP40-201ENST00000517211 242 ntBASIC2.27□□□□□ -2.05
LTBQ06643 HSPE1P18-201ENST00000517602 280 ntBASIC2.27□□□□□ -2.05
LTBQ06643 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.27□□□□□ -2.05
LTBQ06643 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.27□□□□□ -2.05
LTBQ06643 MIR5006-201ENST00000583027 110 ntBASIC2.27□□□□□ -2.05
LTBQ06643 AL162424.1-201ENST00000602325 221 ntBASIC2.27□□□□□ -2.05
LTBQ06643 AC037487.3-201ENST00000606668 112 ntBASIC2.27□□□□□ -2.05
LTBQ06643 TCL6_2.1-201ENST00000615162 119 ntBASIC2.27□□□□□ -2.05
LTBQ06643 FTX_2.1-201ENST00000618816 94 ntBASIC2.27□□□□□ -2.05
LTBQ06643 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.27□□□□□ -2.05
LTBQ06643 MIR3674-201ENST00000636576 68 ntBASIC2.27□□□□□ -2.05
LTBQ06643 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
LTBQ06643 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
LTBQ06643 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LTBQ06643 AC007336.1-201ENST00000576365 3828 ntBASIC2.27□□□□□ -2.05
LTBQ06643 AL359854.1-201ENST00000614203 1594 ntBASIC2.27□□□□□ -2.05
LTBQ06643 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.27□□□□□ -2.05
LTBQ06643 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
LTBQ06643 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
LTBQ06643 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LTBQ06643 RNU6-461P-201ENST00000364195 107 ntBASIC2.26□□□□□ -2.05
LTBQ06643 RNU6-454P-201ENST00000364292 107 ntBASIC2.26□□□□□ -2.05
LTBQ06643 Y_RNA.292-201ENST00000364904 97 ntBASIC2.26□□□□□ -2.05
LTBQ06643 RNU6-662P-201ENST00000384253 104 ntBASIC2.26□□□□□ -2.05
LTBQ06643 MIR320B2-201ENST00000408479 138 ntBASIC2.26□□□□□ -2.05
LTBQ06643 Y_RNA.626-201ENST00000411288 95 ntBASIC2.26□□□□□ -2.05
LTBQ06643 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.26□□□□□ -2.05
LTBQ06643 AC009963.1-201ENST00000417265 157 ntBASIC2.26□□□□□ -2.05
LTBQ06643 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.26□□□□□ -2.05
LTBQ06643 Y_RNA.644-201ENST00000459006 113 ntBASIC2.26□□□□□ -2.05
LTBQ06643 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.26□□□□□ -2.05
LTBQ06643 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
LTBQ06643 Y_RNA.674-201ENST00000516362 113 ntBASIC2.26□□□□□ -2.05
LTBQ06643 CBX3P4-201ENST00000538909 354 ntBASIC2.26□□□□□ -2.05
LTBQ06643 AC026470.2-201ENST00000561492 181 ntBASIC2.26□□□□□ -2.05
LTBQ06643 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.26□□□□□ -2.05
LTBQ06643 MIR4282-201ENST00000583613 67 ntBASIC2.26□□□□□ -2.05
LTBQ06643 MIR4765-201ENST00000585007 77 ntBASIC2.26□□□□□ -2.05
LTBQ06643 RPL30P11-203ENST00000598995 310 ntBASIC2.26□□□□□ -2.05
LTBQ06643 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.25□□□□□ -2.05
LTBQ06643 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
LTBQ06643 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.25□□□□□ -2.05
LTBQ06643 UBE2WP1-201ENST00000362030 340 ntBASIC2.25□□□□□ -2.05
LTBQ06643 MIR411-201ENST00000362239 96 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNA5SP289-201ENST00000362332 137 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU4-80P-201ENST00000363200 141 ntBASIC2.25□□□□□ -2.05
LTBQ06643 Y_RNA.118-201ENST00000363300 101 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNA5SP456-201ENST00000364002 114 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU6-1062P-201ENST00000383908 107 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU6-1289P-201ENST00000384431 106 ntBASIC2.25□□□□□ -2.05
LTBQ06643 MIR27B-201ENST00000385129 97 ntBASIC2.25□□□□□ -2.05
LTBQ06643 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LTBQ06643 AL603908.1-201ENST00000406098 201 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU2-54P-201ENST00000410299 190 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RN7SKP223-201ENST00000410582 62 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU2-61P-201ENST00000411069 191 ntBASIC2.25□□□□□ -2.05
LTBQ06643 MTND2P29-201ENST00000438595 412 ntBASIC2.25□□□□□ -2.05
LTBQ06643 AL138752.1-201ENST00000452964 351 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNA5SP320-201ENST00000516263 124 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU6-155P-201ENST00000516347 100 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU6-344P-201ENST00000516635 111 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU6-107P-201ENST00000516643 102 ntBASIC2.25□□□□□ -2.05
LTBQ06643 RNU1-117P-201ENST00000517041 158 ntBASIC2.25□□□□□ -2.05
LTBQ06643 AC024405.2-202ENST00000532731 184 ntBASIC2.25□□□□□ -2.05
LTBQ06643 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.25□□□□□ -2.05
LTBQ06643 AC103810.1-201ENST00000579873 453 ntBASIC2.25□□□□□ -2.05
LTBQ06643 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.25□□□□□ -2.05
LTBQ06643 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.25□□□□□ -2.05
LTBQ06643 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LTBQ06643 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms