Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL353149.1-201ENST00000610667 244 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.55□□□□□ -2.16
GABPAQ06546 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
GABPAQ06546 U3.8-201ENST00000363675 217 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 Y_RNA.287-201ENST00000364853 94 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 SNORD81.2-201ENST00000365153 76 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 RNU6-1240P-201ENST00000365155 104 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 RNU6-281P-201ENST00000384212 103 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 SNORA75.4-201ENST00000391278 119 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 PDCL2P1-201ENST00000419302 352 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 RNU6-221P-201ENST00000459541 99 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 MTND4P17-201ENST00000470444 350 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 AC027575.1-201ENST00000481064 460 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.54□□□□□ -2.16
GABPAQ06546 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.54□□□□□ -2.16
GABPAQ06546 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.54□□□□□ -2.16
GABPAQ06546 AC068338.1-201ENST00000565567 176 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 MIR5701-3-201ENST00000578890 82 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 MIR5701-1-201ENST00000585138 82 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 MIR5701-2-201ENST00000615634 82 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.54□□□□□ -2.16
GABPAQ06546 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.54□□□□□ -2.16
GABPAQ06546 MTND5P35-201ENST00000557537 1720 ntBASIC1.54□□□□□ -2.16
GABPAQ06546 SNORA33-201ENST00000363664 130 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 RNU6-414P-201ENST00000363705 104 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 RNA5SP467-201ENST00000391274 118 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 RN7SKP51-201ENST00000410781 304 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 MTCYBP10-201ENST00000424905 650 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.53□□□□□ -2.16
GABPAQ06546 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 AC093303.1-201ENST00000514549 295 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 RNU6-1114P-201ENST00000516022 107 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 SCARNA16.2-201ENST00000516520 172 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 RNU6-1213P-201ENST00000517075 94 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 RNA5SP437-201ENST00000517249 129 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 AC093023.1-201ENST00000547375 507 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 AK6P2-201ENST00000549020 471 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 AC005899.2-201ENST00000584353 90 ntBASIC1.53□□□□□ -2.16
GABPAQ06546 MIR424-201ENST00000362227 98 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 Y_RNA.166-201ENST00000363730 102 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 Y_RNA.364-201ENST00000365532 101 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 RNA5SP323-201ENST00000391094 133 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 MIR1185-2-201ENST00000408687 86 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 RNU4-14P-201ENST00000410858 122 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 AC016909.1-201ENST00000415916 166 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 AC092423.1-201ENST00000430165 186 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 AC073910.1-201ENST00000445047 438 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 AC112492.4-201ENST00000456549 352 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 AC116353.2-201ENST00000505332 712 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 PRDX4P1-201ENST00000507189 574 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 Y_RNA.683-201ENST00000516508 93 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.52□□□□□ -2.17
GABPAQ06546 AC090617.3-201ENST00000573670 475 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.52□□□□□ -2.17
GABPAQ06546 AC022306.2-201ENST00000617563 647 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 AC092794.2-201ENST00000620933 563 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 TPTEP1-208ENST00000636884 213 ntBASIC1.52□□□□□ -2.17
GABPAQ06546 RNU6-360P-201ENST00000390944 104 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 RNU1-139P-201ENST00000391307 165 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 MIR1276-201ENST00000408707 83 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.51□□□□□ -2.17
GABPAQ06546 AC069257.2-201ENST00000441819 155 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 NDUFB4P10-201ENST00000452541 359 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 Y_RNA.635-201ENST00000459041 101 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.51□□□□□ -2.17
GABPAQ06546 AC025465.3-201ENST00000510570 311 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 RNU6-307P-201ENST00000516743 106 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 RNA5SP481-201ENST00000516814 122 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 AC091144.1-201ENST00000519573 138 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.51□□□□□ -2.17
GABPAQ06546 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.51□□□□□ -2.17
GABPAQ06546 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.51□□□□□ -2.17
GABPAQ06546 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
GABPAQ06546 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
GABPAQ06546 MIR126-201ENST00000362291 85 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 RNU6-874P-201ENST00000362390 105 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 RNU6-1266P-201ENST00000362794 105 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 RNU6-879P-201ENST00000364328 108 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 SNORA63D-201ENST00000364359 132 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 Y_RNA.358-201ENST00000365491 99 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.5□□□□□ -2.17
GABPAQ06546 Y_RNA.557-201ENST00000384680 107 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 MIR515-2-201ENST00000384883 83 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 MIR515-1-201ENST00000384884 83 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 RNU6-1001P-201ENST00000411265 100 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 RNU6-1304P-201ENST00000411374 106 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 AC138393.2-201ENST00000414742 246 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 AC098614.3-201ENST00000438957 440 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 MTND4P18-201ENST00000447010 465 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms