Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ELOCP21-201ENST00000412558 336 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 TOMM22P2-201ENST00000430735 237 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 RPS29P11-201ENST00000496507 171 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 AC108210.2-201ENST00000503681 201 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.81□□□□□ -2.12
CDK3Q00526 AC074133.1-201ENST00000515696 183 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 SNORA40.9-201ENST00000515895 93 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 RNU6-1170P-201ENST00000515974 106 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 RNU6-976P-201ENST00000516086 111 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 RNU6-1146P-201ENST00000516282 102 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 RNU6-548P-201ENST00000517083 115 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 AC018448.1-201ENST00000552843 316 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 AC015712.3-201ENST00000559380 164 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 MIR4448-201ENST00000584360 86 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.81□□□□□ -2.12
CDK3Q00526 AL353149.1-201ENST00000610667 244 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 AC138305.3-201ENST00000624988 240 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
CDK3Q00526 AL359851.1-201ENST00000569460 4997 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 RNU6-1266P-201ENST00000362794 105 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 RNU6-417P-201ENST00000384712 107 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 CYCSP49-201ENST00000420810 319 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.8□□□□□ -2.12
CDK3Q00526 HMGN2P23-201ENST00000456759 269 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 RNU6-625P-201ENST00000459412 107 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 AL442163.3-201ENST00000554110 156 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 AC006600.1-201ENST00000572529 153 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
CDK3Q00526 AC008749.1-201ENST00000597650 306 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.8□□□□□ -2.12
CDK3Q00526 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 AL050343.2-201ENST00000607338 280 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
CDK3Q00526 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.8□□□□□ -2.12
CDK3Q00526 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDK3Q00526 ZNF72P-201ENST00000425869 1908 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 Y_RNA.5-201ENST00000362334 102 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 Y_RNA.61-201ENST00000362835 102 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 Y_RNA.197-201ENST00000364004 102 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 RNU6-1264P-201ENST00000383891 107 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 RNU6-926P-201ENST00000384075 107 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 Y_RNA.496-201ENST00000384444 101 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 RNA5SP100-201ENST00000410903 110 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 RNA5SP59-201ENST00000410922 110 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.79□□□□□ -2.12
CDK3Q00526 CST2P1-201ENST00000425770 87 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 CHEK2P4-201ENST00000450340 246 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 RNA5SP233-201ENST00000459153 113 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.79□□□□□ -2.12
CDK3Q00526 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.79□□□□□ -2.12
CDK3Q00526 AL109918.3-201ENST00000603072 338 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 AC092447.9-201ENST00000603395 144 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 AL080274.1-201ENST00000605565 220 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 AL627230.6-201ENST00000611129 280 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.79□□□□□ -2.12
CDK3Q00526 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.79□□□□□ -2.12
CDK3Q00526 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
CDK3Q00526 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDK3Q00526 Y_RNA.252-201ENST00000364556 101 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 Y_RNA.287-201ENST00000364853 94 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 RNY3P4-201ENST00000384428 101 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 RNU6-911P-201ENST00000516523 104 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.78□□□□□ -2.12
CDK3Q00526 VN1R91P-201ENST00000594377 169 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 MIR4272-201ENST00000635924 64 ntBASIC1.78□□□□□ -2.12
CDK3Q00526 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
CDK3Q00526 Y_RNA.39-201ENST00000362620 98 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 SNORA33-201ENST00000363664 130 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 RNU6-708P-201ENST00000384217 107 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 AC009310.1-201ENST00000414414 451 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.77□□□□□ -2.13
CDK3Q00526 HMGN2P19-201ENST00000425149 265 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 RAB28P5-201ENST00000427490 651 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.77□□□□□ -2.13
CDK3Q00526 AC010409.1-201ENST00000487382 476 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 RNU6-408P-201ENST00000515910 100 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 AC027419.1-201ENST00000522976 328 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 MIR4769-201ENST00000584126 77 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 AC090574.1-201ENST00000623186 233 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 AC091925.1-201ENST00000623204 462 ntBASIC1.77□□□□□ -2.13
CDK3Q00526 MTND4P29-201ENST00000503122 1372 ntBASIC1.76□□□□□ -2.13
CDK3Q00526 MIR369-201ENST00000362155 70 ntBASIC1.76□□□□□ -2.13
CDK3Q00526 RNU6-797P-201ENST00000363101 109 ntBASIC1.76□□□□□ -2.13
CDK3Q00526 RNU6-112P-201ENST00000363599 104 ntBASIC1.76□□□□□ -2.13
CDK3Q00526 RNU6-1019P-201ENST00000364424 107 ntBASIC1.76□□□□□ -2.13
CDK3Q00526 Y_RNA.460-201ENST00000384255 102 ntBASIC1.76□□□□□ -2.13
CDK3Q00526 SNORD78.2-201ENST00000391076 69 ntBASIC1.76□□□□□ -2.13
CDK3Q00526 RNA5SP467-201ENST00000391274 118 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms