Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MIR103A1-201ENST00000362165 78 ntBASIC0.06□□□□□ -2.4
CCL20P78556 Y_RNA.560-201ENST00000384689 102 ntBASIC0.06□□□□□ -2.4
CCL20P78556 MIR520C-201ENST00000385005 87 ntBASIC0.06□□□□□ -2.4
CCL20P78556 MTND4P32-201ENST00000437189 1237 ntBASIC0.06□□□□□ -2.4
CCL20P78556 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.06□□□□□ -2.4
CCL20P78556 RPS20P10-201ENST00000451209 253 ntBASIC0.06□□□□□ -2.4
CCL20P78556 AC107401.1-201ENST00000503426 685 ntBASIC0.06□□□□□ -2.4
CCL20P78556 AC023442.1-201ENST00000531247 422 ntBASIC0.06□□□□□ -2.4
CCL20P78556 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.06□□□□□ -2.4
CCL20P78556 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.06□□□□□ -2.4
CCL20P78556 AC007684.1-201ENST00000609671 477 ntBASIC0.06□□□□□ -2.4
CCL20P78556 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CCL20P78556 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CCL20P78556 MIR1-1-201ENST00000362147 71 ntBASIC0.05□□□□□ -2.4
CCL20P78556 Y_RNA.184-201ENST00000363884 108 ntBASIC0.05□□□□□ -2.4
CCL20P78556 SNORD113.3-201ENST00000364630 78 ntBASIC0.05□□□□□ -2.4
CCL20P78556 RNU6-933P-201ENST00000384424 107 ntBASIC0.05□□□□□ -2.4
CCL20P78556 RNU6-297P-201ENST00000384636 107 ntBASIC0.05□□□□□ -2.4
CCL20P78556 RNU6-376P-201ENST00000384731 106 ntBASIC0.05□□□□□ -2.4
CCL20P78556 MIR32-201ENST00000384965 70 ntBASIC0.05□□□□□ -2.4
CCL20P78556 MIR452-201ENST00000385020 85 ntBASIC0.05□□□□□ -2.4
CCL20P78556 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.05□□□□□ -2.4
CCL20P78556 Z98949.2-201ENST00000440996 144 ntBASIC0.05□□□□□ -2.4
CCL20P78556 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.05□□□□□ -2.4
CCL20P78556 AC091179.3-201ENST00000474761 144 ntBASIC0.05□□□□□ -2.4
CCL20P78556 CYCTP-201ENST00000504253 315 ntBASIC0.05□□□□□ -2.4
CCL20P78556 RNU6-189P-201ENST00000516120 101 ntBASIC0.05□□□□□ -2.4
CCL20P78556 RNU6-1198P-201ENST00000516904 67 ntBASIC0.05□□□□□ -2.4
CCL20P78556 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.05□□□□□ -2.4
CCL20P78556 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.05□□□□□ -2.4
CCL20P78556 AL157687.1-201ENST00000554853 619 ntBASIC0.05□□□□□ -2.4
CCL20P78556 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.05□□□□□ -2.4
CCL20P78556 AC120024.3-201ENST00000603167 156 ntBASIC0.05□□□□□ -2.4
CCL20P78556 AL357078.3-201ENST00000607528 618 ntBASIC0.05□□□□□ -2.4
CCL20P78556 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.05□□□□□ -2.4
CCL20P78556 RNA5SP48-201ENST00000363969 126 ntBASIC0.04□□□□□ -2.4
CCL20P78556 RNU4-41P-201ENST00000364426 143 ntBASIC0.04□□□□□ -2.4
CCL20P78556 Y_RNA.319-201ENST00000365138 92 ntBASIC0.04□□□□□ -2.4
CCL20P78556 MIR573-201ENST00000384964 99 ntBASIC0.04□□□□□ -2.4
CCL20P78556 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
CCL20P78556 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.04□□□□□ -2.4
CCL20P78556 PIGPP3-201ENST00000425307 415 ntBASIC0.04□□□□□ -2.4
CCL20P78556 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.04□□□□□ -2.4
CCL20P78556 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.04□□□□□ -2.4
CCL20P78556 RNU7-63P-201ENST00000459054 62 ntBASIC0.04□□□□□ -2.4
CCL20P78556 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
CCL20P78556 AC074133.1-201ENST00000515696 183 ntBASIC0.04□□□□□ -2.4
CCL20P78556 RNU6-1096P-201ENST00000517089 102 ntBASIC0.04□□□□□ -2.4
CCL20P78556 MRPS36P3-201ENST00000519284 130 ntBASIC0.04□□□□□ -2.4
CCL20P78556 MIR4431-201ENST00000579990 94 ntBASIC0.04□□□□□ -2.4
CCL20P78556 AC073544.1-201ENST00000600110 1595 ntBASIC0.03□□□□□ -2.4
CCL20P78556 RNU6-1120P-201ENST00000362988 108 ntBASIC0.03□□□□□ -2.4
CCL20P78556 SNORD14.1-201ENST00000365609 90 ntBASIC0.03□□□□□ -2.4
CCL20P78556 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CCL20P78556 AL590002.1-201ENST00000406554 418 ntBASIC0.03□□□□□ -2.4
CCL20P78556 AL606923.1-201ENST00000406616 190 ntBASIC0.03□□□□□ -2.4
CCL20P78556 Y_RNA.595-201ENST00000410403 105 ntBASIC0.03□□□□□ -2.4
CCL20P78556 RNU6-321P-201ENST00000410912 106 ntBASIC0.03□□□□□ -2.4
CCL20P78556 MTATP6P18-201ENST00000417994 673 ntBASIC0.03□□□□□ -2.4
CCL20P78556 HSFY5P-201ENST00000453726 309 ntBASIC0.03□□□□□ -2.4
CCL20P78556 SNORD42A-201ENST00000459584 64 ntBASIC0.03□□□□□ -2.4
CCL20P78556 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.03□□□□□ -2.4
CCL20P78556 MTCO1P29-201ENST00000496868 288 ntBASIC0.03□□□□□ -2.4
CCL20P78556 RNA5SP458-201ENST00000516188 119 ntBASIC0.03□□□□□ -2.4
CCL20P78556 SNORA74.3-201ENST00000517108 154 ntBASIC0.03□□□□□ -2.4
CCL20P78556 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.03□□□□□ -2.4
CCL20P78556 AC093027.1-201ENST00000546698 429 ntBASIC0.03□□□□□ -2.4
CCL20P78556 CPDP1-201ENST00000579660 283 ntBASIC0.03□□□□□ -2.4
CCL20P78556 AC090616.2-202ENST00000584248 222 ntBASIC0.03□□□□□ -2.4
CCL20P78556 AC136443.5-201ENST00000603741 370 ntBASIC0.03□□□□□ -2.4
CCL20P78556 AL162730.1-201ENST00000605734 292 ntBASIC0.03□□□□□ -2.4
CCL20P78556 AC027279.3-201ENST00000625055 122 ntBASIC0.03□□□□□ -2.4
CCL20P78556 AC068137.4-201ENST00000638485 296 ntBASIC0.03□□□□□ -2.4
CCL20P78556 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.02□□□□□ -2.41
CCL20P78556 RNA5SP62-201ENST00000363457 110 ntBASIC0.02□□□□□ -2.41
CCL20P78556 RNU6-654P-201ENST00000364373 107 ntBASIC0.02□□□□□ -2.41
CCL20P78556 RNU4-28P-201ENST00000364739 141 ntBASIC0.02□□□□□ -2.41
CCL20P78556 RNU6-407P-201ENST00000365280 104 ntBASIC0.02□□□□□ -2.41
CCL20P78556 RNU6-996P-201ENST00000365438 107 ntBASIC0.02□□□□□ -2.41
CCL20P78556 RNU6-1304P-201ENST00000411374 106 ntBASIC0.02□□□□□ -2.41
CCL20P78556 Z82188.1-201ENST00000436709 154 ntBASIC0.02□□□□□ -2.41
CCL20P78556 AL359672.1-201ENST00000442302 409 ntBASIC0.02□□□□□ -2.41
CCL20P78556 SNRPGP12-201ENST00000449481 213 ntBASIC0.02□□□□□ -2.41
CCL20P78556 MTCO3P10-201ENST00000455912 772 ntBASIC0.02□□□□□ -2.41
CCL20P78556 TPTE2P5-203ENST00000458118 728 ntBASIC0.02□□□□□ -2.41
CCL20P78556 AC091885.1-201ENST00000506658 268 ntBASIC0.02□□□□□ -2.41
CCL20P78556 MTATP6P9-201ENST00000515039 680 ntBASIC0.02□□□□□ -2.41
CCL20P78556 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.02□□□□□ -2.41
CCL20P78556 RNU11-2P-201ENST00000516898 142 ntBASIC0.02□□□□□ -2.41
CCL20P78556 AC091144.1-201ENST00000519573 138 ntBASIC0.02□□□□□ -2.41
CCL20P78556 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
CCL20P78556 AC010999.1-201ENST00000611856 324 ntBASIC0.02□□□□□ -2.41
CCL20P78556 AC015726.2-201ENST00000620112 122 ntBASIC0.02□□□□□ -2.41
CCL20P78556 AC092634.7-201ENST00000621022 103 ntBASIC0.02□□□□□ -2.41
CCL20P78556 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
CCL20P78556 MIR18A-201ENST00000362310 71 ntBASIC0.01□□□□□ -2.41
CCL20P78556 RNY1P10-201ENST00000363268 113 ntBASIC0.01□□□□□ -2.41
CCL20P78556 SNORD115-32-201ENST00000364079 82 ntBASIC0.01□□□□□ -2.41
CCL20P78556 RNU4-9P-201ENST00000364951 139 ntBASIC0.01□□□□□ -2.41
CCL20P78556 RNU4-45P-201ENST00000365469 141 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms