Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC027288.2-201ENST00000553028 243 ntBASIC-0.12□□□□□ -2.43
LSM6P62312 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.12□□□□□ -2.43
LSM6P62312 U2.17-201ENST00000611454 95 ntBASIC-0.12□□□□□ -2.43
LSM6P62312 AC091925.1-201ENST00000623204 462 ntBASIC-0.12□□□□□ -2.43
LSM6P62312 MIR520C-201ENST00000385005 87 ntBASIC-0.13□□□□□ -2.43
LSM6P62312 SNORA40.8-201ENST00000411034 126 ntBASIC-0.13□□□□□ -2.43
LSM6P62312 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.13□□□□□ -2.43
LSM6P62312 AC105417.1-201ENST00000514691 285 ntBASIC-0.13□□□□□ -2.43
LSM6P62312 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.13□□□□□ -2.43
LSM6P62312 RNU2-46P-201ENST00000517038 113 ntBASIC-0.13□□□□□ -2.43
LSM6P62312 AC069113.3-201ENST00000521019 150 ntBASIC-0.13□□□□□ -2.43
LSM6P62312 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.13□□□□□ -2.43
LSM6P62312 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.13□□□□□ -2.43
LSM6P62312 AC018645.2-201ENST00000609151 472 ntBASIC-0.13□□□□□ -2.43
LSM6P62312 AC027279.3-201ENST00000625055 122 ntBASIC-0.13□□□□□ -2.43
LSM6P62312 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.14□□□□□ -2.43
LSM6P62312 AC073261.1-201ENST00000429409 121 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 MTND3P9-201ENST00000429526 346 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 AC092436.3-201ENST00000511788 257 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 RNU7-172P-201ENST00000517125 64 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 MTND1P5-201ENST00000517906 940 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 AC104383.1-201ENST00000530297 370 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
LSM6P62312 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.14□□□□□ -2.43
LSM6P62312 RNU4-5P-201ENST00000607255 135 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 AC006566.1-201ENST00000608943 513 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 AL157392.4-201ENST00000609756 345 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 MIR371B-201ENST00000638082 66 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 AC068137.4-201ENST00000638485 296 ntBASIC-0.14□□□□□ -2.43
LSM6P62312 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
LSM6P62312 SNORA1B-201ENST00000362535 133 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 RNA5SP63-201ENST00000391225 112 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 MTND1P22-201ENST00000510572 951 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 AC097462.1-201ENST00000514125 324 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.15□□□□□ -2.43
LSM6P62312 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.15□□□□□ -2.43
LSM6P62312 AC093027.1-201ENST00000546698 429 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.15□□□□□ -2.43
LSM6P62312 MIR4509-3-201ENST00000578671 94 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 MIR4509-2-201ENST00000583920 94 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 MIR4509-1-201ENST00000618224 94 ntBASIC-0.15□□□□□ -2.43
LSM6P62312 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 RNU6-137P-201ENST00000363680 108 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 RNU6-906P-201ENST00000384700 70 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 MIR15B-201ENST00000385045 98 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 RNU2-29P-201ENST00000410423 189 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.16□□□□□ -2.44
LSM6P62312 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 SNORD65B-201ENST00000459126 73 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 AC010598.1-201ENST00000510378 103 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 SNORA74.3-201ENST00000517108 154 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 AL358944.1-201ENST00000528537 144 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 AC023157.2-201ENST00000540596 141 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 MTND4P33-201ENST00000556706 766 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 MIR1273G-201ENST00000577677 100 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 MIR5190-201ENST00000581537 80 ntBASIC-0.16□□□□□ -2.44
LSM6P62312 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.17□□□□□ -2.44
LSM6P62312 ZNF885P-201ENST00000420174 1098 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 MTND4LP16-201ENST00000440828 295 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 PCNPP5-201ENST00000452246 481 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.17□□□□□ -2.44
LSM6P62312 AF186996.7-201ENST00000492781 209 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 RPL39P5-202ENST00000512505 151 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 MTND1P35-201ENST00000526739 508 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 RMST_3.1-201ENST00000611651 109 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 uc_338.16-201ENST00000621804 95 ntBASIC-0.17□□□□□ -2.44
LSM6P62312 RNA5SP214-201ENST00000363378 118 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 SNORD114-9-201ENST00000364370 72 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 SNORD14.1-201ENST00000365609 90 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 SNORA2B-201ENST00000384583 137 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.18□□□□□ -2.44
LSM6P62312 AC005534.2-201ENST00000431047 433 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 HMGN2P26-201ENST00000463169 339 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 AC091021.1-201ENST00000468051 388 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 RNU7-41P-201ENST00000515917 61 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 RNU7-43P-201ENST00000516554 64 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.18□□□□□ -2.44
LSM6P62312 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.18□□□□□ -2.44
LSM6P62312 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.18□□□□□ -2.44
LSM6P62312 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.18□□□□□ -2.44
LSM6P62312 AC091178.2-201ENST00000584401 117 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 AC120024.3-201ENST00000603167 156 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 MIR7844-201ENST00000616161 122 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 AC078938.1-201ENST00000620993 318 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 AL008636.1-201ENST00000625038 1018 ntBASIC-0.18□□□□□ -2.44
LSM6P62312 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.19□□□□□ -2.44
LSM6P62312 SNORD115-8-201ENST00000363856 82 ntBASIC-0.19□□□□□ -2.44
LSM6P62312 SNORD115-38-201ENST00000365037 82 ntBASIC-0.19□□□□□ -2.44
LSM6P62312 MIR489-201ENST00000384923 84 ntBASIC-0.19□□□□□ -2.44
LSM6P62312 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.19□□□□□ -2.44
LSM6P62312 AL358176.2-201ENST00000425769 204 ntBASIC-0.19□□□□□ -2.44
LSM6P62312 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.19□□□□□ -2.44
LSM6P62312 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.19□□□□□ -2.44
LSM6P62312 MIR3612-201ENST00000579753 87 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms