Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS3AP61247 CHEK2P4-201ENST00000450340 246 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 AC024995.1-201ENST00000523014 93 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 AC084364.2-201ENST00000546924 395 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 AC018448.1-201ENST00000552843 316 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 Y_RNA.5-201ENST00000362334 102 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 SNORD42.2-201ENST00000365570 69 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 SNORD12B-201ENST00000410433 91 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS3AP61247 AC112492.4-201ENST00000456549 352 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.92□□□□□ -2.1
RPS3AP61247 SNORA40.9-201ENST00000515895 93 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 RNU6-911P-201ENST00000516523 104 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPS3AP61247 AL442163.3-201ENST00000554110 156 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS3AP61247 MIR3684-201ENST00000579779 74 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 AC091925.1-201ENST00000623204 462 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 AC138305.3-201ENST00000624988 240 ntBASIC1.92□□□□□ -2.1
RPS3AP61247 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS3AP61247 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
RPS3AP61247 RNU4-42P-201ENST00000364738 142 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 RNU6-625P-201ENST00000459412 107 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 RNU7-169P-201ENST00000459456 61 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 AC027575.1-201ENST00000481064 460 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 RPS29P21-201ENST00000496272 170 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 SNORD116.3-201ENST00000517176 78 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 GNAI2P1-201ENST00000541815 315 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 AL137100.2-201ENST00000555786 315 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 MIR4298-201ENST00000584380 73 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 AL080274.1-201ENST00000605565 220 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS3AP61247 U2.1-201ENST00000618978 145 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 AL160413.1-201ENST00000622780 310 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 AC006435.5-201ENST00000624486 112 ntBASIC1.91□□□□□ -2.1
RPS3AP61247 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPS3AP61247 RNU6-661P-201ENST00000362409 107 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 SNORA63D-201ENST00000364359 132 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 RNY3P4-201ENST00000384428 101 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 MIR628-201ENST00000385229 95 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RPS3AP61247 RNU2-7P-201ENST00000410794 178 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 RNU6-976P-201ENST00000516086 111 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 RNA5SP481-201ENST00000516814 122 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 IGKV3-31-201ENST00000523109 329 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.9□□□□□ -2.11
RPS3AP61247 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
RPS3AP61247 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
RPS3AP61247 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
RPS3AP61247 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
RPS3AP61247 MIR369-201ENST00000362155 70 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.89□□□□□ -2.11
RPS3AP61247 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS3AP61247 Y_RNA.639-201ENST00000458981 102 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 SNORD65B-201ENST00000459126 73 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 RPL23AP63-201ENST00000498752 471 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.89□□□□□ -2.11
RPS3AP61247 AC010598.1-201ENST00000510378 103 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 RNU1-41P-201ENST00000516161 162 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 RNU1-48P-201ENST00000516400 162 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 RNU1-142P-201ENST00000516682 145 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS3AP61247 AL359075.3-201ENST00000613288 217 ntBASIC1.89□□□□□ -2.11
RPS3AP61247 Y_RNA.138-201ENST00000363462 102 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 SNORA33-201ENST00000363664 130 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 Y_RNA.197-201ENST00000364004 102 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 Y_RNA.252-201ENST00000364556 101 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 Y_RNA.395-201ENST00000383945 109 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 Y_RNA.431-201ENST00000384086 102 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 RNU6-1310P-201ENST00000384153 107 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 SNORA64-201ENST00000384674 134 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 RNA5SP323-201ENST00000391094 133 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 RNA5SP467-201ENST00000391274 118 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 RNA5SP475-201ENST00000410568 110 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 AC018865.2-201ENST00000423631 129 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 RAB28P5-201ENST00000427490 651 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 AL137792.2-201ENST00000443484 235 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 HMGN1P13-201ENST00000505795 138 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 VN1R91P-201ENST00000594377 169 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
RPS3AP61247 uc_338.22-201ENST00000622722 187 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 MIR3674-201ENST00000636576 68 ntBASIC1.88□□□□□ -2.11
RPS3AP61247 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
RPS3AP61247 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RPS3AP61247 AL356292.1-201ENST00000283110 373 ntBASIC1.87□□□□□ -2.11
RPS3AP61247 RNU1-115P-201ENST00000365329 160 ntBASIC1.87□□□□□ -2.11
RPS3AP61247 Y_RNA.460-201ENST00000384255 102 ntBASIC1.87□□□□□ -2.11
RPS3AP61247 MTCO3P19-201ENST00000415864 321 ntBASIC1.87□□□□□ -2.11
RPS3AP61247 AC096644.2-201ENST00000429278 159 ntBASIC1.87□□□□□ -2.11
RPS3AP61247 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RPS3AP61247 HSPE1P9-201ENST00000440046 311 ntBASIC1.87□□□□□ -2.11
RPS3AP61247 FCF1P4-201ENST00000448326 183 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms