Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.1□□□□□ -2.07
ERVFC1-1P60608 MIR449C-201ENST00000516047 92 ntBASIC2.1□□□□□ -2.07
ERVFC1-1P60608 SCARNA11.3-201ENST00000517276 130 ntBASIC2.1□□□□□ -2.07
ERVFC1-1P60608 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.1□□□□□ -2.07
ERVFC1-1P60608 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.1□□□□□ -2.07
ERVFC1-1P60608 AC121758.2-201ENST00000553271 193 ntBASIC2.1□□□□□ -2.07
ERVFC1-1P60608 MIR4308-201ENST00000580634 81 ntBASIC2.1□□□□□ -2.07
ERVFC1-1P60608 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.1□□□□□ -2.07
ERVFC1-1P60608 AL713866.2-201ENST00000603579 219 ntBASIC2.1□□□□□ -2.07
ERVFC1-1P60608 AC006380.1-201ENST00000603598 186 ntBASIC2.1□□□□□ -2.07
ERVFC1-1P60608 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ERVFC1-1P60608 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.09□□□□□ -2.07
ERVFC1-1P60608 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.09□□□□□ -2.07
ERVFC1-1P60608 RNU6-1272P-201ENST00000362776 107 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 RNU6-486P-201ENST00000363116 107 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 U3.8-201ENST00000363675 217 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 Y_RNA.243-201ENST00000364481 109 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 SNORA71.1-201ENST00000364523 117 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 RNU6-923P-201ENST00000364753 107 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 Y_RNA.304-201ENST00000365011 112 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 Y_RNA.308-201ENST00000365043 101 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 Y_RNA.464-201ENST00000384282 110 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 RNU6-1274P-201ENST00000384557 107 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 MIR548M-201ENST00000408260 86 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 RN7SKP51-201ENST00000410781 304 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.09□□□□□ -2.07
ERVFC1-1P60608 TOMM22P2-201ENST00000430735 237 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.09□□□□□ -2.07
ERVFC1-1P60608 AC011753.1-201ENST00000451001 220 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 Y_RNA.637-201ENST00000459424 114 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
ERVFC1-1P60608 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.09□□□□□ -2.07
ERVFC1-1P60608 RNU6-255P-201ENST00000516957 105 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ERVFC1-1P60608 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.09□□□□□ -2.07
ERVFC1-1P60608 MIR4658-201ENST00000584344 65 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 AL670379.2-201ENST00000604983 252 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 MIR7106-201ENST00000612419 65 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 AC090517.3-201ENST00000625170 141 ntBASIC2.09□□□□□ -2.07
ERVFC1-1P60608 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.09□□□□□ -2.08
ERVFC1-1P60608 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AC068700.1-201ENST00000565862 3754 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 RNU6-653P-201ENST00000363074 106 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 RNU6-324P-201ENST00000363957 106 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 Y_RNA.361-201ENST00000365515 120 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AL031003.1-201ENST00000404229 172 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AC024067.1-201ENST00000426199 223 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 BTF3P11-201ENST00000426582 477 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 RPL30P4-201ENST00000429309 333 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 SNORA59A-201ENST00000459326 152 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 HMGB3P3-201ENST00000510526 400 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 RNU6-1212P-201ENST00000517023 104 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AC072026.1-201ENST00000605023 201 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 RPL17P51-201ENST00000605218 238 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AL365265.1-201ENST00000621045 234 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 U6.115-201ENST00000636045 103 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 MIR7515-201ENST00000637837 67 ntBASIC2.08□□□□□ -2.08
ERVFC1-1P60608 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
ERVFC1-1P60608 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 RNU6-774P-201ENST00000363238 107 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 RNU6-801P-201ENST00000364087 105 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 RNU6-1305P-201ENST00000364353 104 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 Y_RNA.233-201ENST00000364407 101 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 MIR586-201ENST00000385035 97 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 RNA5SP210-201ENST00000391034 120 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.07□□□□□ -2.08
ERVFC1-1P60608 MICF-203ENST00000432679 129 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.07□□□□□ -2.08
ERVFC1-1P60608 U8.19-201ENST00000459095 133 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 S100A11P2-201ENST00000467589 312 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.07□□□□□ -2.08
ERVFC1-1P60608 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ERVFC1-1P60608 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.07□□□□□ -2.08
ERVFC1-1P60608 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.07□□□□□ -2.08
ERVFC1-1P60608 RNU5F-4P-201ENST00000516581 114 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 AL137100.2-201ENST00000555786 315 ntBASIC2.07□□□□□ -2.08
ERVFC1-1P60608 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.07□□□□□ -2.08
ERVFC1-1P60608 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
ERVFC1-1P60608 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ERVFC1-1P60608 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.06□□□□□ -2.08
ERVFC1-1P60608 Y_RNA.262-201ENST00000364641 102 ntBASIC2.06□□□□□ -2.08
ERVFC1-1P60608 RNU6-763P-201ENST00000390865 106 ntBASIC2.06□□□□□ -2.08
ERVFC1-1P60608 RNU6-1248P-201ENST00000391096 64 ntBASIC2.06□□□□□ -2.08
ERVFC1-1P60608 SNORA26.5-201ENST00000391215 123 ntBASIC2.06□□□□□ -2.08
ERVFC1-1P60608 AC007064.1-201ENST00000412238 351 ntBASIC2.06□□□□□ -2.08
ERVFC1-1P60608 AC104389.3-201ENST00000445629 235 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms