Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 AC073544.1-201ENST00000600110 1595 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
RHBDL3P58872 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RHBDL3P58872 MIR934-201ENST00000401241 83 ntBASIC2.22□□□□□ -2.05
RHBDL3P58872 ELOCP24-201ENST00000456370 334 ntBASIC2.22□□□□□ -2.05
RHBDL3P58872 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.22□□□□□ -2.05
RHBDL3P58872 RNU6-470P-201ENST00000515954 104 ntBASIC2.22□□□□□ -2.05
RHBDL3P58872 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.22□□□□□ -2.05
RHBDL3P58872 AL132765.2-201ENST00000610812 351 ntBASIC2.22□□□□□ -2.05
RHBDL3P58872 uc_338.20-201ENST00000621563 178 ntBASIC2.22□□□□□ -2.05
RHBDL3P58872 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RHBDL3P58872 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RHBDL3P58872 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.21□□□□□ -2.06
RHBDL3P58872 RNU6-490P-201ENST00000362985 107 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 Y_RNA.498-201ENST00000384460 102 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 RNY4P36-201ENST00000391116 96 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 SNORA17.3-201ENST00000391159 129 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 MIR1267-201ENST00000408723 78 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.21□□□□□ -2.06
RHBDL3P58872 MTND4P28-201ENST00000426217 387 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 AC091951.2-201ENST00000500762 203 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.21□□□□□ -2.06
RHBDL3P58872 RNU6-277P-201ENST00000516272 106 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 RNU6-875P-201ENST00000516488 106 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.21□□□□□ -2.06
RHBDL3P58872 AP000942.3-201ENST00000603702 160 ntBASIC2.21□□□□□ -2.06
RHBDL3P58872 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RHBDL3P58872 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RHBDL3P58872 Y_RNA.263-201ENST00000364659 114 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 RNU6-1310P-201ENST00000384153 107 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 COX6CP10-201ENST00000416832 224 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 RPL31P63-201ENST00000422565 375 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 AC236972.2-201ENST00000434979 310 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 SUMO1P2-201ENST00000452524 304 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.2□□□□□ -2.06
RHBDL3P58872 AC010598.1-201ENST00000510378 103 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 AC107393.1-201ENST00000512403 346 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.2□□□□□ -2.06
RHBDL3P58872 MIR3683-201ENST00000580847 82 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.2□□□□□ -2.06
RHBDL3P58872 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
RHBDL3P58872 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.19□□□□□ -2.06
RHBDL3P58872 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.19□□□□□ -2.06
RHBDL3P58872 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.19□□□□□ -2.06
RHBDL3P58872 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.19□□□□□ -2.06
RHBDL3P58872 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.19□□□□□ -2.06
RHBDL3P58872 AC084768.2-201ENST00000622736 221 ntBASIC2.19□□□□□ -2.06
RHBDL3P58872 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RHBDL3P58872 MIR410-201ENST00000362222 80 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 RNA5SP361-201ENST00000362686 118 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 Y_RNA.303-201ENST00000364998 94 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 Y_RNA.592-201ENST00000410274 109 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 AC010154.1-201ENST00000425857 269 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 JTBP1-201ENST00000441314 247 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 snoU13.9-201ENST00000458927 103 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 snoU13.27-201ENST00000459278 104 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 RNU6-625P-201ENST00000459412 107 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 RNU7-94P-201ENST00000459576 63 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 RPL26P26-201ENST00000480251 434 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RHBDL3P58872 RNU6-250P-201ENST00000516958 103 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 RNA5SP437-201ENST00000517249 129 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 AC018448.1-201ENST00000552843 316 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 AC012493.3-201ENST00000604494 112 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 U6.73-201ENST00000619194 103 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 MTND5P10-201ENST00000603719 1809 ntBASIC2.18□□□□□ -2.06
RHBDL3P58872 RNU6-271P-201ENST00000363858 105 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 RNA5SP467-201ENST00000391274 118 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 AL627390.1-201ENST00000396055 340 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 RNA5SP475-201ENST00000410568 110 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 Y_RNA.605-201ENST00000410577 105 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.17□□□□□ -2.06
RHBDL3P58872 AL117351.2-201ENST00000513571 157 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.17□□□□□ -2.06
RHBDL3P58872 AL355375.2-201ENST00000574825 175 ntBASIC2.17□□□□□ -2.06
RHBDL3P58872 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RHBDL3P58872 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
RHBDL3P58872 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RHBDL3P58872 RNU6-1301P-201ENST00000362724 104 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 MT-TD-201ENST00000387419 68 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 ELOCP21-201ENST00000412558 336 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDL3P58872 MTCO3P10-201ENST00000455912 772 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 SNORD65B-201ENST00000459126 73 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 RPS26P45-201ENST00000471748 340 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.16□□□□□ -2.06
RHBDL3P58872 SNORA40.9-201ENST00000515895 93 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 RNU7-99P-201ENST00000516271 62 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 Y_RNA.718-201ENST00000517110 102 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 MIR4709-201ENST00000577272 72 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 MIR4255-201ENST00000579351 72 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 MIR8081-201ENST00000611533 95 ntBASIC2.16□□□□□ -2.06
RHBDL3P58872 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RHBDL3P58872 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms