Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.66□□□□□ -2.3
CLDN18P56856 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CLDN18P56856 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CLDN18P56856 RNA5SP361-201ENST00000362686 118 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CLDN18P56856 MIR153-2-201ENST00000385225 87 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 CALM2P4-201ENST00000430810 426 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 RPEP5-201ENST00000441137 268 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 LINC01399-202ENST00000458450 244 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 RNU7-90P-201ENST00000459216 62 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 AC010469.2-201ENST00000496412 480 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 AC022493.2-201ENST00000506122 481 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 AC091885.1-201ENST00000506658 268 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 RNU6-917P-201ENST00000516294 104 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 RNU6-107P-201ENST00000516643 102 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 MTATP6P24-201ENST00000576835 677 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 MIR5000-201ENST00000577717 103 ntBASIC0.65□□□□□ -2.31
CLDN18P56856 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.65□□□□□ -2.31
CLDN18P56856 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CLDN18P56856 RNU6-873P-201ENST00000363833 107 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 SNORD115-8-201ENST00000363856 82 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 SNORD115-38-201ENST00000365037 82 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 Y_RNA.354-201ENST00000365448 111 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 RNU6-969P-201ENST00000383900 105 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 RNU6-17P-201ENST00000384245 107 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 RNU6-18P-201ENST00000384527 107 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 U8.16-201ENST00000391279 133 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 RNU4-55P-201ENST00000410731 137 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.64□□□□□ -2.31
CLDN18P56856 Z82188.1-201ENST00000436709 154 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 AC104332.1-201ENST00000440471 797 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.64□□□□□ -2.31
CLDN18P56856 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.64□□□□□ -2.31
CLDN18P56856 RNU6-1208P-201ENST00000459588 107 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.64□□□□□ -2.31
CLDN18P56856 AP002001.1-203ENST00000534002 267 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 AL391262.2-201ENST00000622466 494 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 MIR6079-201ENST00000635807 62 ntBASIC0.64□□□□□ -2.31
CLDN18P56856 MTND4P12-201ENST00000498999 1377 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 RNU5F-3P-201ENST00000363767 117 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 Y_RNA.184-201ENST00000363884 108 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 RNU6-280P-201ENST00000364145 104 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 Y_RNA.267-201ENST00000364679 109 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 RPL30P16-201ENST00000419341 429 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 MRPS10P1-201ENST00000448483 130 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.63□□□□□ -2.31
CLDN18P56856 PCMTD1P1-201ENST00000455560 355 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 RNU6-956P-201ENST00000458868 103 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 SNORD65B-201ENST00000459126 73 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 7SK.7-201ENST00000603504 247 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 AL133215.3-201ENST00000609801 448 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 AC017083.3-201ENST00000609955 700 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 AC106800.4-201ENST00000614905 153 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 MIR7111-201ENST00000619751 72 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
CLDN18P56856 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CLDN18P56856 SNORD50.1-201ENST00000362987 71 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 Y_RNA.179-201ENST00000363844 90 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 RNU6-793P-201ENST00000384233 104 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 RNU6-424P-201ENST00000384367 105 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 MTCO3P18-201ENST00000440206 761 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 MTND4P18-201ENST00000447010 465 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 MTND3P16-201ENST00000452205 344 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 RNU7-21P-201ENST00000459430 62 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 RNU6-261P-201ENST00000459506 102 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.62□□□□□ -2.31
CLDN18P56856 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 POLR3GP2-201ENST00000588366 668 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 AC012557.2-201ENST00000605919 418 ntBASIC0.62□□□□□ -2.31
CLDN18P56856 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.62□□□□□ -2.31
CLDN18P56856 CASC19-280ENST00000642102 1351 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 Y_RNA.100-201ENST00000363141 102 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 SNORD115-32-201ENST00000364079 82 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 RNU4-20P-201ENST00000365601 151 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 SNORA69-201ENST00000383895 132 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 SNORD116-13-201ENST00000384408 92 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 MIR489-201ENST00000384923 84 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.61□□□□□ -2.31
CLDN18P56856 FABP5P4-201ENST00000437203 171 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.61□□□□□ -2.31
CLDN18P56856 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.61□□□□□ -2.31
CLDN18P56856 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.61□□□□□ -2.31
CLDN18P56856 RNU7-187P-201ENST00000458985 68 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 AC091179.3-201ENST00000474761 144 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 RPS26P48-201ENST00000491713 339 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 RNU7-28P-201ENST00000516759 62 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 RNU7-172P-201ENST00000517125 64 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.61□□□□□ -2.31
CLDN18P56856 AC145350.1-201ENST00000567426 208 ntBASIC0.61□□□□□ -2.31
CLDN18P56856 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
CLDN18P56856 AL442644.1-201ENST00000454390 3105 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms