Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL031003.1-201ENST00000404229 172 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.38□□□□□ -2.03
SUMO3P55854 TRBVB-201ENST00000477100 408 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.38□□□□□ -2.03
SUMO3P55854 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.38□□□□□ -2.03
SUMO3P55854 RNA5SP356-201ENST00000515972 94 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 RN7SKP132-201ENST00000516001 208 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 SNORA70.12-201ENST00000516084 153 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 RNU6-1041P-201ENST00000516254 102 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 RNA5SP76-201ENST00000516277 87 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 RNU6-570P-201ENST00000517051 105 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.38□□□□□ -2.03
SUMO3P55854 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.38□□□□□ -2.03
SUMO3P55854 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.38□□□□□ -2.03
SUMO3P55854 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.38□□□□□ -2.03
SUMO3P55854 MIR4503-201ENST00000582187 83 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 U4.1-201ENST00000620349 87 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 IGHVIII-44-202ENST00000636235 289 ntBASIC2.38□□□□□ -2.03
SUMO3P55854 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SUMO3P55854 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
SUMO3P55854 snoU2-30.2-201ENST00000362805 70 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 RNU6-324P-201ENST00000363957 106 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SUMO3P55854 Y_RNA.383-201ENST00000383855 97 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 Y_RNA.461-201ENST00000384263 103 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 Y_RNA.541-201ENST00000384640 113 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 MIR524-201ENST00000385242 87 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 RNU11-3P-201ENST00000391111 133 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 RNA5SP184-201ENST00000411071 108 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.37□□□□□ -2.03
SUMO3P55854 AL121890.1-201ENST00000435457 205 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 CR769767.1-201ENST00000436337 346 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 POLR2KP2-201ENST00000438155 177 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
SUMO3P55854 RPL39P40-201ENST00000445481 146 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.37□□□□□ -2.03
SUMO3P55854 RPL23AP3-201ENST00000453844 468 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 RPS27AP9-201ENST00000477681 438 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.37□□□□□ -2.03
SUMO3P55854 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 AC005786.1-201ENST00000588553 154 ntBASIC2.37□□□□□ -2.03
SUMO3P55854 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SUMO3P55854 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SUMO3P55854 AC062016.1-201ENST00000355719 319 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 SNORA27.1-201ENST00000362604 124 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 Y_RNA.452-201ENST00000384202 108 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 RNU6-472P-201ENST00000384299 107 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 Y_RNA.569-201ENST00000384749 103 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 MT-TW-201ENST00000387382 68 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 MIR873-201ENST00000401120 77 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 MIR1283-2-201ENST00000408621 87 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 HMGN2P34-201ENST00000437647 269 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 AL049873.1-201ENST00000480540 376 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 RNU7-193P-201ENST00000516723 65 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 AL137100.2-201ENST00000555786 315 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
SUMO3P55854 MIR338-201ENST00000636369 67 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 CENPCP1-201ENST00000533085 2578 ntBASIC2.36□□□□□ -2.03
SUMO3P55854 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SUMO3P55854 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SUMO3P55854 Y_RNA.136-201ENST00000363444 102 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 RNU6-525P-201ENST00000363685 104 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 Y_RNA.287-201ENST00000364853 94 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 Y_RNA.329-201ENST00000365209 107 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 RNU6-326P-201ENST00000365480 107 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 Y_RNA.396-201ENST00000383949 103 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 RNU1-138P-201ENST00000384093 164 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 Y_RNA.518-201ENST00000384552 113 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SUMO3P55854 SNORA53-201ENST00000391141 249 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 MTND4LP30-201ENST00000454092 297 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
SUMO3P55854 AC009127.3-201ENST00000570531 403 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 MIR4319-201ENST00000577285 85 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 MIR4529-201ENST00000578110 78 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.35□□□□□ -2.03
SUMO3P55854 MTND5P6-201ENST00000422338 1798 ntBASIC2.35□□□□□ -2.03
SUMO3P55854 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.35□□□□□ -2.03
SUMO3P55854 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SUMO3P55854 ZNF271P-202ENST00000465539 1970 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 AC010615.1-201ENST00000594254 1764 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SUMO3P55854 Y_RNA.483-201ENST00000384380 101 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 AL117342.1-201ENST00000404861 406 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 RNU6-710P-201ENST00000410424 105 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 RNU2-61P-201ENST00000411069 191 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 AC024067.1-201ENST00000426199 223 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 HMGN2P3-201ENST00000433603 273 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 HMGN2P5-201ENST00000436882 273 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 RPL23AP7-203ENST00000449021 469 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.34□□□□□ -2.03
SUMO3P55854 RNU6-1338P-201ENST00000516328 91 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 RNU2-31P-201ENST00000516954 155 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.34□□□□□ -2.03
SUMO3P55854 MIR3149-201ENST00000584629 83 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 AC006023.1-201ENST00000603944 259 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 AC037487.3-201ENST00000606668 112 ntBASIC2.34□□□□□ -2.03
SUMO3P55854 AP001282.2-201ENST00000616149 309 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms